| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5013 |
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| Symbol | |
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| ID | 4313904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2032789 |
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| End bp | 2033592 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152856 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_776896 |
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| Protein GI | 115359758 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.53578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCCA CGAAGCAAGC GGCGAATGCG CCGGTCGTAC TCGTGACCGG CGCCGCGCGC
CGGGCCGGGC GCGCGTTCGC CGAGTATTTC TCCGCGCACG GCTATCGCAC CGCGGTTCAC
TACGACCGCT CGGCCGATGC CGCGCATGCG GCGGCCCGCA CGATCGCCGA ACGCGGGCAC
GACTCCGTCG CGCTGCAGGC CGACCTGTCG GATGCTGCAC AGATCACCGC GTTGATCGAC
CAGGTGTATG CGCGCTTCGG CCGCCTCGAC GTGCTGGTCA ACAACGCGTC GGTGTTCTGG
CAGGACCATT TCCCGAGCTT CGACCTCGCG GCGTTCGACC AGGCGTGGGC CGTCAACTGT
CGCGCGCCGA TCCTGCTCAC GCGCGCGTTC TACGAACGGG CCCGTGCGGC CGGCACGCAG
GGCGTCGTCG TGAACGTGGT CGACCAGAAG ATCAAGGAAA ACTTCCACCG CGACCATTTC
AGCTACACGG TCGCGAAGGC CGCGCTCGGC AACCTCACGC AGATGCTCGC GCTGTCGTCG
TCGCCGGTGC TGCGCGTGAA CGCGGTGTTC CCCGGGCTGA TGCTGCCGAG CGACGACCAG
ACGCAAGCCG ACTTCGAACA CGCGAGCCGC GCGTCGACGC CGCTCGCGCG CATCGCCGGC
CCCGACGACG TCGCGAGCGC GATCCTGCTG CTGACGGGCA GCGCCTACAA CGGCGTGGAT
TTCGTCGTCG ACGCGGGGCA GAACCTGATT CGCGTCGACC AGGACGTGCT GTACAAGCAT
CGCTCGCCGG CCGGCAAGCA CTGA
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| Protein sequence | MQSTKQAANA PVVLVTGAAR RAGRAFAEYF SAHGYRTAVH YDRSADAAHA AARTIAERGH
DSVALQADLS DAAQITALID QVYARFGRLD VLVNNASVFW QDHFPSFDLA AFDQAWAVNC
RAPILLTRAF YERARAAGTQ GVVVNVVDQK IKENFHRDHF SYTVAKAALG NLTQMLALSS
SPVLRVNAVF PGLMLPSDDQ TQADFEHASR ASTPLARIAG PDDVASAILL LTGSAYNGVD
FVVDAGQNLI RVDQDVLYKH RSPAGKH
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