Gene Bamb_5005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5005 
Symbol 
ID4313896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2025787 
End bp2026734 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content67% 
IMG OID638152848 
Productaldo/keto reductase 
Protein accessionYP_776888 
Protein GI115359750 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTAC GCACCCTCGG CACGTCGGAC ATCCAGGTTT CCCCGCTCGC CTTCGGCGGC 
AACGTCTTCG GCTGGACCGT CGACGAGAAC GCATCGTTTG CGCTGCTCGA CGCGCTCGCC
GACACCGGCA TCAACTTCAT CGACACGGCC GACGTCTATT CGGCCTGGGC GCCCGGCAAC
AGCGGCGGCG AATCCGAAAC GATCATCGGC AAGTGGCTCA AGCGCTCCGG CAAGCGCGAC
CAGGTCGTGA TCGCGACCAA GGTCGGCCTG CTCGAGGCGC GCGCGGGCCT GTCGAAGGAC
AACATCCTGA AGGCCGCCGA CGATTCGCTG CGCCGCCTGC AGACCGACTA CATCGACCTG
TATTTCTCGC ACCGCGATCT CGCCGACACG GCCCCGCTCG AGGAAACGCT CGCCGCCTAC
CAGACGCTGA TCGACGCGGG CAAGGTGCGC ATCATCGGCG CGTCGAACTA CAGCGGCGCG
CGCCTGCGCG AAGCCGCCGA CATCAGCAAG CGCGACGGCC TGCCGGCTTA CCAGGTGATC
CAGCCGGAAT ACAACCTGAT CGACCGTGCC GAATACGAGC ACGATCTCGA ACCGGTCGTG
CGCGACCTGA AACTCGGCGT CGTCAACTAC TACGCACTCG CGAGCGGCTT CCTGTCGGGC
AAGTACCGCA GCGAGGCCGA CCTGAAGAAG AGCGTGCGCG GCGATCGCGT CGCCGGCTAT
CTCGATGCGC GCGGCCTGCG CATTCTCGCG GCGCTCGACG ACGTGTCGGC GAAGCACGGC
ACGCAACCGG CCGCGATCGC ACTCGCGTGG CAGATCGCGC GGCCGACGAT CACCGCGCCG
ATCGCGAGCG CGACGTCGCT GTCGCAGCTC GCGCTGCTCG GCGAAGCGAT CCGCGTGAAG
CTCGATGACG AAGATATTCG CAAGATCGAC GAGGCCAGCG CGGTGTGA
 
Protein sequence
MALRTLGTSD IQVSPLAFGG NVFGWTVDEN ASFALLDALA DTGINFIDTA DVYSAWAPGN 
SGGESETIIG KWLKRSGKRD QVVIATKVGL LEARAGLSKD NILKAADDSL RRLQTDYIDL
YFSHRDLADT APLEETLAAY QTLIDAGKVR IIGASNYSGA RLREAADISK RDGLPAYQVI
QPEYNLIDRA EYEHDLEPVV RDLKLGVVNY YALASGFLSG KYRSEADLKK SVRGDRVAGY
LDARGLRILA ALDDVSAKHG TQPAAIALAW QIARPTITAP IASATSLSQL ALLGEAIRVK
LDDEDIRKID EASAV