Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5001 |
Symbol | |
ID | 4313892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2021395 |
End bp | 2022516 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152844 |
Product | alcohol dehydrogenase |
Protein accession | YP_776884 |
Protein GI | 115359746 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAC TTCAATGGCA CGGCCCACGC GACCTCCGCG TGGTCGATCT CGACACGCCA CGCGCGGGGC CCGGCGAGGT CCGCATCGCG GTCGCGTATT GCGGCATCTG CGGCAGCGAC CTGCACGAAT ATGCGGACGG CCCGCACGCG ATTCCGGTCG ACACGCCGCA TCCGCTGTCC GGCCGCACCG CACCGCTCAC GCTCGGTCAC GAGTTCTGCG GCACCGTCGT CGAAGTCGGC GCGGGCGTGA CGACGCTGAC CCCGGGCGAC CGCGTCGCGG TCGAGCCCGA GTATCACTGC CACCAGTGCG CGTACTGCCG CTCGGGCTCG TACAACCTGT GCGTATCGAT GGGCTTCGCC GGCCTGATGG GCGATGGCGG GATGGCCGAC TTCGCGGTCG TGCCGGCCTA CATGCTGCAT CGGCTCCCTG ACGACATCAG TCTCGAACAG GCCGCGGTGA TGGAACCGGC GGCCGTCGCG CTGCATGCGC TGCGGCGCGG CGAGCTGCGG CTCGGCGACA CCTGCGCGGT GTTCGGCCTC GGGCCGATTG GCCTGCTGCT GATCATGCTC GCGAAGCTGC AGGGCGCGAC GACCATCGTC GCGGTCGACG TGTCGCCGGA GCGGCTCGCC GCGGCCGCGC GCTTCGGCGC GACGCACGCG TTCGACGCGC GCTCGCTCGA CGCGCCGGTG CTGCGCGACG CGATTCGCGA GGCGGCGGGC GGGCTCGGCG TCGACGTGAG CTTCGAGGCG GCCGGCCTGC CGGCCACGTT CGAGGCCGCG ATGCAGGGGC TGCGCAAGGG CGGCCGCCTC GTGATGGTCG GCCTGATGCC GCATGCGGGT TTCGATGCGT TCCGCGCGGT CAACGACGAG CTGACCTTCA CGGCGAGCGT CGGCTACCGG CACGTGTACG AAGACCTGCT GCGGCTGATC GGGTCGGGCG CGCTCGATCT CACGTCGATC GTCACGCGCA CGGTCGCGCT CGACGATGCC GTCGCCGACG GCTTCGACGC GCTGCTCGCC GATCGCGCGC AGATCAAGAT CCTGGTTGCG CCGCCGCGCC GTCATGCGCG CCGTCCTCAC ACCGTCGGGA GCATCGAGCA TGAGCCGACC CTGGTCGTTT GA
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Protein sequence | MRALQWHGPR DLRVVDLDTP RAGPGEVRIA VAYCGICGSD LHEYADGPHA IPVDTPHPLS GRTAPLTLGH EFCGTVVEVG AGVTTLTPGD RVAVEPEYHC HQCAYCRSGS YNLCVSMGFA GLMGDGGMAD FAVVPAYMLH RLPDDISLEQ AAVMEPAAVA LHALRRGELR LGDTCAVFGL GPIGLLLIML AKLQGATTIV AVDVSPERLA AAARFGATHA FDARSLDAPV LRDAIREAAG GLGVDVSFEA AGLPATFEAA MQGLRKGGRL VMVGLMPHAG FDAFRAVNDE LTFTASVGYR HVYEDLLRLI GSGALDLTSI VTRTVALDDA VADGFDALLA DRAQIKILVA PPRRHARRPH TVGSIEHEPT LVV
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