| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4998 |
|---|
| Symbol | |
|---|
| ID | 4313889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2017836 |
|---|
| End bp | 2019323 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638152841 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_776881 |
|---|
| Protein GI | 115359743 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.427023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGG TTCGGATGCT GGACGAAGTC AGGGCGTTTC TCGCGCGCGA ACACGGTCAT
TACATCGACG GCCGCGCGGT AGCCGGCCGC GGCGAACGGA TCGACGTGCG CGATCCGGCC
ACGCGCGCGG TGATCGGCTC GGTCGCGCAG GCGACCGACG ACGACGTCGA AGCCGCGCTC
GCGTCGTCGC ATCGCGCGTT TCGCGGCGAG TGGGCCAACC TGACGCCGGC CGATCGCGAG
CGGATCCTGC TGCGCTTCGC GGACCTGATC GAAGCCCATG GCGAAGAGAT CGCGCAGATC
GAGACCGCGC AGTCGGGCAA GCTGATCGGG CTGTCGCGCG TGATCGAGGT CGGCTGGTCT
GCGCGCTGGC TGCGCTATTA CGCGGGCTGG GCCACGAAGA TCGCGGGCGA AACGCTCGCC
CCGTCGTTTC CCAGCATGAA CGGCGAGCGC TACACGTCGT TTACGCTGCG CGAACCGCTG
GGCGTCGTGT TCGGGATCAT TCCGTGGAAT TTCCCGGTGA TGATCCCCGT GTGGAAATTC
GGCGCGGCGC TCGCGACCGG CAACACGGTG CTCATCAAGT CGTCGGAGTT CACGCCGCTC
ACGATGCTGC GCATCGCCGA GCTGGCGACC GAAGCCGGCT TGCCCGCCGG CACGCTGAAC
GTGATCAACG GCACCGGCCA GGTCGGCGCG AAGGTGATCG GCGATCCGCG CGTGGCGAAG
GTGTCGTTCA CGGGTTCGGT GCCGACCGGT CGCATCATCG GCGAGCAAGC CGTCAACGCA
AACTTCACGC GCTTCACGCT CGAGCTGGGC GGCAAGAACG CGGCGGCATT CCTGGCCGAT
ACACCGGTCG ACAAGATTCT CGATGGCATC GTCGAAGCGG GGTTCCTGCA TAGCGGGCAA
GTGTGCGCGT CGGCCGAACG CTTCTTCGTG CATCGTTCGA AGTTCGACGA GGTGGTCGAA
AAGATGAAGG CGCGCTTGGA CGGCTTCCAG CCGGCCGATC CGATGGACGA CGCGGGGATG
ATCGGCCCTG TCTGCAACGA ACCGCAGTTC CGCAAGTGCG TCGACGCGTT CGACGTTGCG
CGCGCGGAAG GCGACACGAT CGTCACCGGC GGCGGCGCGT ACGCGCGCGA CGGCTTCTAC
GTGAAGCCGA CGATCGTGCT GCCGCGTTCG CTGGAATCGG CTTCGTACCG CAAGGAGATT
TTCGGGCCGG TCGGCGCGTT CGTGCCGTTC GACGACGAGG AAGAGCTGAT CGCGATGATG
AACGACACGC CGTTCGGGCT GACCGCGAGC CTGTGGACGA ACGATCTGTC GAAGGCGCTG
CGCTACGTGC CGCGCATCGA AGCCGGCACC GTGTGGGTGA ACATGCATAC GCTGGTCGAC
CCGGCCGTTC CGTTCGGCGG CGCGAAGGGG TCCGGCATCG GCCGCGAATA TGGTTCGTCG
TTCATCGATG CCTATACCGA GCCGAAAGCG GTGACCATTC GCTTCTGA
|
|---|
| Protein sequence | MALVRMLDEV RAFLAREHGH YIDGRAVAGR GERIDVRDPA TRAVIGSVAQ ATDDDVEAAL
ASSHRAFRGE WANLTPADRE RILLRFADLI EAHGEEIAQI ETAQSGKLIG LSRVIEVGWS
ARWLRYYAGW ATKIAGETLA PSFPSMNGER YTSFTLREPL GVVFGIIPWN FPVMIPVWKF
GAALATGNTV LIKSSEFTPL TMLRIAELAT EAGLPAGTLN VINGTGQVGA KVIGDPRVAK
VSFTGSVPTG RIIGEQAVNA NFTRFTLELG GKNAAAFLAD TPVDKILDGI VEAGFLHSGQ
VCASAERFFV HRSKFDEVVE KMKARLDGFQ PADPMDDAGM IGPVCNEPQF RKCVDAFDVA
RAEGDTIVTG GGAYARDGFY VKPTIVLPRS LESASYRKEI FGPVGAFVPF DDEEELIAMM
NDTPFGLTAS LWTNDLSKAL RYVPRIEAGT VWVNMHTLVD PAVPFGGAKG SGIGREYGSS
FIDAYTEPKA VTIRF
|
|---|
| |