| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4992 |
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| Symbol | |
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| ID | 4313883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2011322 |
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| End bp | 2013559 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152835 |
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| Product | hypothetical protein |
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| Protein accession | YP_776875 |
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| Protein GI | 115359737 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.934351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATG ACCTTTCGCG CGTGTTGCGC TTCAAGCCGC ATTTGCTCGT GCTCGATGCG
GGGCCCGAGA CCCTGTTCGT CGTCGACGAG TTCAAGCGCA CGATGCTGTC CGGTGCGATC
TTCGTGCGGA TCGCCGCGTG CCTGCGGGCG CGCATGACGA CCGCCGAGAT CGTGACGACG
CTTGCCGGCA CGTTCGGCGA ATGGGACGTG CTCGCGCGGC TCGACCACCT GGTGCGCCGC
GGCTACGTGC GCGCCGATCC GCCGCACGAC GACGATGCCG CGCGCGGCTT CTTCGAGCGC
GCCGGGCTCG ACGGTGACGC GGCTTGCGCG CGCGTCGTTC AACTGCGCGT CGCGGTCGAG
GCGTTCGGTG CCGACGATGC GGCGCTCCGG CGCGCGCTCG ACACGGCCGG CATCGATGTC
GTGCCGGACG CCGAACTGAC CGTCGCGATC GCCGATACGC ACGATCGCGA CGATCTCGCC
GCGTGCGCCG AGCGCGTGGC GGCGCGCGGC GGGGCATTGC TCCTTGTGGC GGCCGGTGGC
GTGCAGACGC TGATCGGGCC GTTGCTGGCC GGCGGCGGCG CGCTGGCCGA TGCGCCGTGC
ATCGAATGCG TGCGCTACTG GATTCGCATC AACCGGCCGG TCGAGACACT GCTTGCGCGC
CATCACGGCA GCGCGGCAAC GCGTCTGCCG CCGGCCGCGT CGCGTGCCGG CGCCGCTGCC
GCCGCGGCGT TCGTGGCGGC GACGGTCGAG CAGATCGCGG TCAACCGCAC GATAGCGGAA
CGTTCGCAAA CGCATATCGT GGCGCAGCGC ATCGATACGT TGACCGTCGA ACGGCACCGC
GTGATCAGGC GTCCGCAATG CCCGTGCTGC GGCAAACCCG CATGGATGCG CGAGCAGGCG
GCGCGTGCGC CGCGGCTCGC CGATCATGCG CCGTTGACGC GCGCCGACGG CGGCTACCGT
ACCGCCGACC CGCAACAGGT GTTCGAGCGT TATGCCCATC TGATCTCGCC GGTCAGTGGC
GCGATCGCGT ATCTGCACCC GATGCCGAAG CGGCACGCGG GCCTGCGCAA GGTCTATGCG
TCGGGCTTTC TCGTGTGCCC GGCCGCCGTA CCGGGCAGCA ACCGGTTCGA CAGGATTTGC
TCCGGCAAGG GCCGCACCGA CGAGCAAGCC CGCGTGAGCG CGCTATGCGA AGCGCTCGAA
CGATTCAGCA GCGTGTATCA GGGCGACGAG GCGAGGCTGA CCGGCAGCAT GGAAAGCCTG
CTCGCCGATC AGGCTTGCGA CGCCGAGCCC ATCCACGTGA ATGAGCTTCA GCAGTTCAGC
GAACGGCAAT TCGCGGCGCG CGACGCGATC AACGCATTGA CCCGCGATGT CCGCAAGCAG
GTGCCGCCGC GCTTCACGTC GCGCGACGTG ATCGACTGGA CGCCTGCATG GTCGCTCGTG
AGCGGCCGGC GCCGCCTCGT GCCGCTGAGT TACTGCTATG CGGAAACGCC GGACAGTGCA
CAGGCGCCGG CCGCGTGCGT GCACAACCCC AACGGCTGCG CGGCGGGTTC GAGCATCGAC
GAGGCGATTC TGCAAGGCAT GCTCGAGTTG ATCGAGCGCG ATGCGGTCGC GATCTGGTGG
TACAACCGGC TTGCACGCCC CGGCATCGAT CTCGCGAGCT TCGATGATTC GTATTTCGAT
GCGCTCGTGC GCGAATACGC GACGCTCGGG TGGCGTTTGT GGGCGCTCGA CATCACCACC
GATCTCGAGG TGCCGACCGT GGCCGCGCTC GCGGAAAATC CGCAAGACGG GCGCTTCTCG
ATCGGTTTCG GCTGCCATCC GGACGGTCGG ATCGCGGTGC AGCGGGCACT GACCGAAGTC
AACCAGTTGC TCGATGTCGC CGCGGATGCG CCGCATCCGT GGGACCGCGA CAAGCTCCCG
GCAACCGGAT TTTTGTATCC GGCGGCCGGC GCGCGTGCAA CGACGCGTTC GACTTGGGAA
CCGGTCGAGG CCGCGTCGCT ACCGGCAGCG CTCGCGCATT GCATCGGGCG CATCGCGGCG
GCCGGCATGG ACGTGCTCGT CGTCGACAAG ACGCGGCCCG ACATCGGCTT GTCCGTGGTG
CAGGTCATCG CGCCGGGGCT GTGTCATTTC TGGCCGCGGT TCGGCGCGCG ACGGTTGTAT
TCGGTGCCGG TCGAACGCGG TTGGCGTGCG CAGCCGTGCG ACGAGATGGA GCTGAATCCG
GCGCTGCTGT TTCTGTGA
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| Protein sequence | MLDDLSRVLR FKPHLLVLDA GPETLFVVDE FKRTMLSGAI FVRIAACLRA RMTTAEIVTT
LAGTFGEWDV LARLDHLVRR GYVRADPPHD DDAARGFFER AGLDGDAACA RVVQLRVAVE
AFGADDAALR RALDTAGIDV VPDAELTVAI ADTHDRDDLA ACAERVAARG GALLLVAAGG
VQTLIGPLLA GGGALADAPC IECVRYWIRI NRPVETLLAR HHGSAATRLP PAASRAGAAA
AAAFVAATVE QIAVNRTIAE RSQTHIVAQR IDTLTVERHR VIRRPQCPCC GKPAWMREQA
ARAPRLADHA PLTRADGGYR TADPQQVFER YAHLISPVSG AIAYLHPMPK RHAGLRKVYA
SGFLVCPAAV PGSNRFDRIC SGKGRTDEQA RVSALCEALE RFSSVYQGDE ARLTGSMESL
LADQACDAEP IHVNELQQFS ERQFAARDAI NALTRDVRKQ VPPRFTSRDV IDWTPAWSLV
SGRRRLVPLS YCYAETPDSA QAPAACVHNP NGCAAGSSID EAILQGMLEL IERDAVAIWW
YNRLARPGID LASFDDSYFD ALVREYATLG WRLWALDITT DLEVPTVAAL AENPQDGRFS
IGFGCHPDGR IAVQRALTEV NQLLDVAADA PHPWDRDKLP ATGFLYPAAG ARATTRSTWE
PVEAASLPAA LAHCIGRIAA AGMDVLVVDK TRPDIGLSVV QVIAPGLCHF WPRFGARRLY
SVPVERGWRA QPCDEMELNP ALLFL
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