Gene Bamb_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4987 
Symbol 
ID4313878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2003902 
End bp2004615 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID638152830 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_776870 
Protein GI115359732 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACA ACCCCTCCCG CGGCCATGCC CGATGCGACG GTCATGGTCC GCATGCCGCC 
CCTGACTGGT TCGCCGGCCT CTGGCACGCA ATCGGCCGCC ATCGCCGCGG CCACGACCCC
TTTGGCGGCG GCGGTCCGTT CGGCGGCCGT GGCGGACGCG GCGGCTTTGG CGATTTCGGC
GACGACGGCA TGCCGCGCGG CCGCCAGTTC AGTTCCGACG ATCTCCAGTT GCTGCTGCTC
GCGCTGGTCG CCGAGCAGCC GAGCCATGGC TACGAGCTGA TCAAGGCGCT CGACACGCGC
TCGAACGGCT TCTACAGCCC GAGCCCCGGC ATGGTGTATC CGGCGCTCAC GTATCTCGAG
GAAGTCGGCT TCGTCGCGTC GCAGGCCGAA GGCAATCGCA AGCGCTATGC GCTGACTGAT
GCCGGTCGCG CGCATCTCGA TGCGCAGCGC GAACGCGTCG ACACGCTGTT CGCGCGCCTC
ACGCACCTCG CGCGCAAGAT GGAATTCATG CGCCGCGCGT TCGCCGGCGA ATCGGCGGGC
AGCGAAGCAC CGGACGACGC ACAGCCCGGC TGGCTTCCGG AGTTCGTCGA AGCGCGTCTC
GCGCTCAAAC GGGCGCTGCT GCACAAGAGC GCCGCCGACG CCGACGAACA ACGGCGCATC
GCGGCGATCA TGCGCCGCGC GACGGCCGAA ATCGAAGGCG GCACCGGCGC GTAA
 
Protein sequence
MRHNPSRGHA RCDGHGPHAA PDWFAGLWHA IGRHRRGHDP FGGGGPFGGR GGRGGFGDFG 
DDGMPRGRQF SSDDLQLLLL ALVAEQPSHG YELIKALDTR SNGFYSPSPG MVYPALTYLE
EVGFVASQAE GNRKRYALTD AGRAHLDAQR ERVDTLFARL THLARKMEFM RRAFAGESAG
SEAPDDAQPG WLPEFVEARL ALKRALLHKS AADADEQRRI AAIMRRATAE IEGGTGA