| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4982 |
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| Symbol | |
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| ID | 4313873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2000055 |
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| End bp | 2000840 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638152825 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_776865 |
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| Protein GI | 115359727 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC TGAATGGCAA GACCGCAGTC GTCACGGGCG CCGCAAGCGG CATCGGCAAG
GAAATCGCAC TGGAGCTGGC CAAGGCGGGT GCGGCCGTCG CGATCGCCGA CCTGAACCAG
GACGGCGCGA ACGCGGTGGC CGACGAGATC AACAAGGCAG GCGGCAAGGC GATCGGCGTC
GCGATGGACG TGACCAACGA GGAGGCCGTG AACAGCGGCA TCGACAAGGT CGCCGAAGCG
TTCGGCTCGG TCGACATCCT CGTGTCGAAC GCCGGCATCC AGATCGTCAA TCCGATCGAG
AACTACGCGT TCTCCGACTG GAAGAAGATG CAGGCGATCC ATGTCGACGG CGCATTCCTG
ACGACGAAGG CGGCGCTCAA GCACATGTAC AAGGATGATC GCGGCGGCGT CGTGATCTAC
ATGGGCTCGG TGCACTCGCA CGAAGCGTCG CCGCTGAAGT CGGCCTACGT GACGGCCAAG
CACGGTCTGC TCGGCCTCGC GCGCGTGCTG GCGAAGGAAG GCGCGAAGCA CAACGTGCGC
TCGCACGTCG TGTGTCCGGG CTTCGTGCGC ACGCCGCTGG TCGACAAGCA GATTCCGGAG
CAGGCGAAGG AGCTCGGAAT CAGCGAAGAG GACGTGATCA AGAAGGTGAT GCTCGGCAAC
ACGGTCGACG GCGTGTTCAC GACGGTGCAG GACGTCGCGC AGACGGTGCT GTTCCTGTCG
GCGTTCCCGA GCGCCGCGCT CACGGGGCAG TCGTTCATCG TCAGCCACGG CTGGTTCATG
CAGTAA
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| Protein sequence | MSNLNGKTAV VTGAASGIGK EIALELAKAG AAVAIADLNQ DGANAVADEI NKAGGKAIGV
AMDVTNEEAV NSGIDKVAEA FGSVDILVSN AGIQIVNPIE NYAFSDWKKM QAIHVDGAFL
TTKAALKHMY KDDRGGVVIY MGSVHSHEAS PLKSAYVTAK HGLLGLARVL AKEGAKHNVR
SHVVCPGFVR TPLVDKQIPE QAKELGISEE DVIKKVMLGN TVDGVFTTVQ DVAQTVLFLS
AFPSAALTGQ SFIVSHGWFM Q
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