Gene Bamb_4978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4978 
Symbol 
ID4313869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1996062 
End bp1997009 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content68% 
IMG OID638152821 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_776861 
Protein GI115359723 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01851] N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.413684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC CCATTGTCTA CATCGACGGC GACCAAGGTA CGACCGGATT GCAGATCCAC 
GAGCGCCTGC GGGATCGCAC CGACCTGCGG CTCGTCACGC TGCCGGATGC CGAGCGCAAG
GACCCGGCAC GGCGCGCCGA AGCCATCAAC GCATCCGATA TCGCGATTCT GTGCCTGCCC
GACGCCGCGG CGCGCGAAGC GGTCGGCTTC ATCCGGAATC CGGCGGTACG CGTGATCGAC
GCGAGTTCGG CCCATCGCAC CGAACCCGAT TGGGTCTACG GTTTTCCCGA GATGGTCGAC
GGACATGCAC AGACAATCGC GCACGCGCGG CGCGTCACCA ATCCGGGCTG CTATCCGACC
GGCGCGGTCG GCCTGCTTCG GCCGCTGCAA CAGGCGGGCC TGCTGCCGCG CGATTACCCG
GTATGCATCC ATGCGGTGTC CGGTTACTCG GGCGGCGGGC GTGCCGCCGT CGACGCGTTC
GAATCGAACG GCGCCGCACG CGCGCAACCG CTTCAGGTCT ACGGCCTCGC GCTCGCGCAC
AAGCATGTGC CCGAGATCCA GCTGCACGCG GGGCTCGCGC ACCGTCCGCT GTTCGTGCCG
GCATACGGCG CGTATCGGCA GGGCATCGTG CTGACCGTGC CGATCGAGCT GCGCCTGCTC
CCGGCCGGCG TGACCGGTGA GGCGCTGCAT GCGTGTCTCG CGCACCATTA CGCCGGCGCG
CGCCGCGTCG AGGTCACGCC GCTCGCAGAC ACGCGCGCGA TCACGCATCT CGATCCGCAA
GCGCTGAACG GGTCGAACGA CCTGCGGCTC AGCGTGTTCG TCAATGCCGA GCACGGTCAG
GTGCTGCTGG CCGCCGTGTT CGACAATCTC GGTAAAGGGG CGTCCGGCGC GGCCGTGCAG
AATCTCGACT TGATGCTCGG TGTGGCGAGC GCGGTGAAAG CGGCATAA
 
Protein sequence
MSLPIVYIDG DQGTTGLQIH ERLRDRTDLR LVTLPDAERK DPARRAEAIN ASDIAILCLP 
DAAAREAVGF IRNPAVRVID ASSAHRTEPD WVYGFPEMVD GHAQTIAHAR RVTNPGCYPT
GAVGLLRPLQ QAGLLPRDYP VCIHAVSGYS GGGRAAVDAF ESNGAARAQP LQVYGLALAH
KHVPEIQLHA GLAHRPLFVP AYGAYRQGIV LTVPIELRLL PAGVTGEALH ACLAHHYAGA
RRVEVTPLAD TRAITHLDPQ ALNGSNDLRL SVFVNAEHGQ VLLAAVFDNL GKGASGAAVQ
NLDLMLGVAS AVKAA