| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4977 |
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| Symbol | |
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| ID | 4313868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1994979 |
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| End bp | 1995902 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152820 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_776860 |
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| Protein GI | 115359722 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.43876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAAAT CGCCGAATCT CGACGACCTG CGCGTATTCA GCCTGGTCGT CCGCCTGACG
AGCTTCAGCG CGGCCGCCGA GCAGCTCGCG GTGTCGCCCG CGTATGTGAG CAAGCGCATC
GCGCTGCTCG AGGCGCAGCT GGGCACGCGC CTGCTGCATC GCTCGACGCG CCGCGTGACG
GTCACGGAAG CCGGCGAGCG CGTGTTCGCG CGTGCCGAGA AGATTCTCGA CGACGTCGAT
CATCTCGTCG AGGATGTGTC GACCACGCGC ACGGTGCCGC GCGGCACGCT GCGTATCTCG
AGCAGCTTCG GCTTCGGCCG CCATGTCGTC GCGCCGGCGC TGCTCGACTT CTCCGCGCGC
TATCCGCAGC TCAACGTGCG GCTCGATCTG TTCGACCGGC TCGTCGACGT CGCGGGCGAA
GGCTACGACC TCGACGTGCG TATCGGCGAC GAGATCGCCG ACCACCTGAT CGCGCGCCGC
CTCGCCACCA ACCATCGCGT GCTGTGCGCG TCGCCCGACT ATCTCGCTCG GCGCGGCACG
CCGCGCACGC TCGCGGATCT CGCGTCGCAC GACTGTCTCG CAATCAAGGA GCGCGACCAT
CCGTTCGGCG TCTGGCGGTT GAACGTGCGC GGGGAAACGG CCACGGTGAA GGTCGGCGGC
GCGCTGTCGA CGAACCACGG CGAGGTGGCC GTGCAATGGG CGCTGGCCGG ACGCGGGATC
GTGCTGCGTT CGATCTGGGA AGCGGCGCCG CTGATCGAGC GCGGCGAGCT CTGTCGCGTG
CTGCCGGACG CGATTCAGCC GGCGAACATC TGGGCCGTGT ATCCGGAACG CGTCGCGGCG
TCGGCGAAGG TGCGCGTGTG CGTCGATTTT CTGGTGGAGG CGCTCGCCGG GTTGAACGCC
GCGGCGAGCG ACGATGCGGG CTGA
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| Protein sequence | MNKSPNLDDL RVFSLVVRLT SFSAAAEQLA VSPAYVSKRI ALLEAQLGTR LLHRSTRRVT
VTEAGERVFA RAEKILDDVD HLVEDVSTTR TVPRGTLRIS SSFGFGRHVV APALLDFSAR
YPQLNVRLDL FDRLVDVAGE GYDLDVRIGD EIADHLIARR LATNHRVLCA SPDYLARRGT
PRTLADLASH DCLAIKERDH PFGVWRLNVR GETATVKVGG ALSTNHGEVA VQWALAGRGI
VLRSIWEAAP LIERGELCRV LPDAIQPANI WAVYPERVAA SAKVRVCVDF LVEALAGLNA
AASDDAG
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