Gene Bamb_4974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4974 
Symbol 
ID4313865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand+ 
Start bp1992128 
End bp1992742 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content67% 
IMG OID638152817 
ProductTetR family transcriptional regulator 
Protein accessionYP_776857 
Protein GI115359719 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.792599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.404801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC ATGATGACCT CTCCGGCGAA CCGGCCGTTC GCGACCGGCT GCTCGACGCG 
GCCGAAGCGC TGATCTACTC GGGCGGCATC CACGCCACGG GTGTCGATGC GATCGTGAAG 
CGGTCCGGCG CCGCGCGAAA GAGCTTTTAT TCGCATTTCG AATCGAAGGA GGCGCTGGTC 
GTCGCCGCGC TCGAGCGCCG TGACGAACGC TGGATGCGCT GGTTCGTCGA TGCAACGCTC 
TCGCGCGGCA AGTCGCCGCG CGCGCACTTG CTCGGCATGT TCGATGCGCT GCGCGACTGG 
TTTGCGCAAC CTGATTTTCA CGGCTGCGCG TTCCTGAACG CATCCGGCGA GATTGCCGAC 
GCCGACGATC CCGTGCGCGT CGTCGCGCGT ATGCACAAGG CGCGTCTGTT GGCGTTCGTG 
CGCGAGCGGT TCGACGCGTA TGCCGACGAC GCCGGGGTCG AGCGTCGCGG GCTGGCCCGT 
CTCGCGCGTC AATGGCTGGT GCTGATCGAC GGCGCGATCG GCGTGGCGCT CGTCAGCGGC 
GATGTAACCG CCGCGCGCGA TGCGCGCGCA ACGGCAGAAC TCTTGCTCGA TACGGTGTCT 
CGAGCGGCGA AGTAG
 
Protein sequence
MNTHDDLSGE PAVRDRLLDA AEALIYSGGI HATGVDAIVK RSGAARKSFY SHFESKEALV 
VAALERRDER WMRWFVDATL SRGKSPRAHL LGMFDALRDW FAQPDFHGCA FLNASGEIAD 
ADDPVRVVAR MHKARLLAFV RERFDAYADD AGVERRGLAR LARQWLVLID GAIGVALVSG 
DVTAARDARA TAELLLDTVS RAAK