| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4969 |
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| Symbol | |
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| ID | 4313860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1986766 |
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| End bp | 1987779 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638152812 |
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| Product | phage integrase family protein |
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| Protein accession | YP_776852 |
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| Protein GI | 115359714 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.188705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.373928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTTC CCACGCCCTC CGACACCCCT GCACGCCCGG AAGAAAAGGA TCTGTTCGAC
CGCGGCGCAT CCGACTGGAT CGTGTCGCCC GAAACCGCAT TCGACGCGTG GCTTGCCATG
CAGGACTACC GCCGTTCGTC AGCCGACGTC TATCGCGCCC AATGGGGTGC GTTTCTCACG
TGGCTGCGGG CCCACCAGAA AAACCTGGCG ACAGTCGATA CCGCATCGAT CGCGAACTTC
GTCGGCGAGC TGCCTATCCG GAAAACGCAG CGCATGCGCT ATCTTCGGCT GATCGAGCGC
GTGCTCGACC ACATCCGGCG CACCGAGCTC GCGTCCACCA ATCCGGCCCG CTTCATTGCT
CAGGATGGCG AAGCGAACTG GCGCCAGGCA CGCGACAACG AGCCGACCGG TTTCCTCACA
CCGGCCGAAC GCGCGAAGCT GCTGGCTTAC CTGTTTTCGC CGATCGGCGT ATCGGGCTCC
GCGTACTGGA AAGAGCGGCG CGACCGCGCG CTCGTCGCTG CGTTTCTCGG CGCCGGCGTG
AAGACCGGCG AAGCACGGGC GCTTACTATT AGTTGCATCA ACACGAGCGG AACGTCGCTC
CAGATCCCGT CGACGCATCC GGATTTCGCA CGCGAAACCC ATCTGGCGTC GTTCGCGATC
GCGTTGCTCG AGGCGTGGCT CGTGGAGCGC AAGCGTCAGG AGATTCCCGG CGAACTCGTG
TTTCCGGCGT CGCACACCGG ACGGCCGATG CACAAGGCGA CGATGCTGCG CGCGATCGAT
GCGATCGTCG AATCGGCGGG GCTCACGTCG TCGCGCAGCG CGCGCGCGAG CCCGCAAACG
CTGCGCAACA CGTATGCGGC CGAACTGTTC GAACACGACG TGCCGCCCGA GCGGGTCGGC
AAATGGCTCG GCTTCATGCG GCCGATCTCG TCGAACCGCC TGCATCGCGC ATGGAAAAAC
TGGCGCGACG GTCTCGCCAA CGGTGACGCG CTCGTCCCCG ACGAAACTCA CTGA
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| Protein sequence | MSLPTPSDTP ARPEEKDLFD RGASDWIVSP ETAFDAWLAM QDYRRSSADV YRAQWGAFLT
WLRAHQKNLA TVDTASIANF VGELPIRKTQ RMRYLRLIER VLDHIRRTEL ASTNPARFIA
QDGEANWRQA RDNEPTGFLT PAERAKLLAY LFSPIGVSGS AYWKERRDRA LVAAFLGAGV
KTGEARALTI SCINTSGTSL QIPSTHPDFA RETHLASFAI ALLEAWLVER KRQEIPGELV
FPASHTGRPM HKATMLRAID AIVESAGLTS SRSARASPQT LRNTYAAELF EHDVPPERVG
KWLGFMRPIS SNRLHRAWKN WRDGLANGDA LVPDETH
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