| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4960 |
|---|
| Symbol | |
|---|
| ID | 4313851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1976847 |
|---|
| End bp | 1977401 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638152803 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_776843 |
|---|
| Protein GI | 115359705 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000098219 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0174202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTATC GTGTTGCCGT CGTCGTCGGC AGTCTGCGTC GCGGTTCCTG GAATCGCGCG
CTCGCGCACG CCGTGATTTC GCTCGCGCCC GCCGATTTCT CGTTCGAATT CGTCGAGATC
GGCGAACTGC CGCTGTACAG CCAGGACTAC GATGCGGATT TGCCGGACGT CGCGAAGCGC
TTCAAGGCGT CGATCGAAGC GGCCGACGCG CTGCTGTTCG TCACGCCTGA GTACAACCGC
TCGATTCCGG GCGTGCTGAA GAACGCGATC GACTGGGGCT CGCGCCCGTG GGGGCACAAC
TCGTGGTCCG GCAAGCCGGG CGCGGTGCTC GGCACGTCGC CGGGTGCGAC CGGCACCGCG
CTCGCGCAGC AGCACCTGCG CAACGTGCTC GCGTATCTCG ACGTGAAGAC GCTCGCGCAG
CCGGAAATGT TCATCAAGCA CGACCCGGCG CGCATCGACG ACCAAGGCCA GATCGTCAGC
GAGGACACCC GCAAGTTCCT GCAGGGCTTC GTCGACCGCT ACGTCGACTG GGTGCGCATG
CTGAAGTCCG CCTGA
|
|---|
| Protein sequence | MSYRVAVVVG SLRRGSWNRA LAHAVISLAP ADFSFEFVEI GELPLYSQDY DADLPDVAKR
FKASIEAADA LLFVTPEYNR SIPGVLKNAI DWGSRPWGHN SWSGKPGAVL GTSPGATGTA
LAQQHLRNVL AYLDVKTLAQ PEMFIKHDPA RIDDQGQIVS EDTRKFLQGF VDRYVDWVRM
LKSA
|
|---|
| |