| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4952 |
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| Symbol | |
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| ID | 4313843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1968289 |
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| End bp | 1969542 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638152795 |
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| Product | amine oxidase |
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| Protein accession | YP_776835 |
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| Protein GI | 115359697 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.15769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0932773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGAA CCGTCCACGT GATCGGTGCA GGACTCGCGG GCCTGTCGGC CGCCGTCGAG
CTGCAACGTC GCGGGCGGCG CATCGTGCTG CACGACGCGC ATGCGCACGC GGGCGGCCGC
TGCCGCTCGT GGTTCGACGG GACACTGAAC ACGACGCTCG ACAGCGGGCT GCATCAGGTG
TTCGCGGGGC AGCCCGCGAC GCAGCGCTAC CTGCGTGCGA TCGGCGCGGC CGATCAGCTC
ACGGGGCCCG CGCTGCCTGA ATGTCCGGTG GCCGACGTCG CGTCGCAGCA GCGCTGGACG
CTGCGCTTCG GCAACGGGCG CTGGCCGTCG TGGCTGTTCG ACGCCGCGTC GCGCGCGCCG
GGTACCACGC CGCTCGACTA CCTCGCGCTG GCCTCGCTCG CGTTCGCGCG CACCGGCCGC
TCGCTCGCAC AGACGATGCG ATGCGACGGC GTGCTGTGGG ATCGTTGGCT GCGCCCCTAT
TTCCTCGGGG TGCTGAACGT CGAGCCGCGC CACGCGAGTG CCGAACTCGC GCGCGCGGTG
CTGTGCGGCA CGTTTGCCGC GGGCGGCCCG GGCTGCCGCC CGCTCGTCGC GCGCCACGGG
CTCGGTAGCG CCTTCGTCGA ACCGGCGCTG CGGATGCTGC AGCACGGCGG CGCGCAGATC
CGGCTGAACT CGCGGCTCGA CGCGTTCGAA TTCGGCGCGC ACGGCAATGC GGTCGATGCG
GTCACGGTCG GCGGCGAGCG CGTGGATCTC GCGCCGGGCG ACGCGATCGT GCTCGCCGTG
CCGCCCGAGG TCGCGCAGCC GCTCGTTCCG GATCTCACCG CGCCCGACAC GTTCAGCGCG
GTCGTGACCG CGTACTTCGC GGTCGACACA CCGGCCGGCG GCCCGCCGCA GACGGCCGTC
GTCAACGGTG TGGTCGACGC GGTGCGCGCG GGCGGCGGCA TGCTCGCGGC GACGATCCGC
GACGCGGGCC GCTGGCTCGA CATGCCGCGC GACGCGCTCG CGCGGCGCAT CTGGGAAGAC
GTCGCGCGCG TGAGCGGCGC GAACCCGGAA ACGATTCCCG CGTGGCAGCT CGTCGTCGAG
CCCCGCGCAG GCTTTGCGGC GGTGCCGTCG CAGGAAATGA AGCGTCCGGC CGCGCGTACG
CGCTGGACCA ATCTCGTGCT GGCGGGCGAC TGGATTGCCA CCGGCTTGCC CGCCACGATC
GAGGGCGCGA TCTGTTCCGG CCAGCTGGCC GCGGACGTGC TCCAGACACA GTAA
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| Protein sequence | MPRTVHVIGA GLAGLSAAVE LQRRGRRIVL HDAHAHAGGR CRSWFDGTLN TTLDSGLHQV
FAGQPATQRY LRAIGAADQL TGPALPECPV ADVASQQRWT LRFGNGRWPS WLFDAASRAP
GTTPLDYLAL ASLAFARTGR SLAQTMRCDG VLWDRWLRPY FLGVLNVEPR HASAELARAV
LCGTFAAGGP GCRPLVARHG LGSAFVEPAL RMLQHGGAQI RLNSRLDAFE FGAHGNAVDA
VTVGGERVDL APGDAIVLAV PPEVAQPLVP DLTAPDTFSA VVTAYFAVDT PAGGPPQTAV
VNGVVDAVRA GGGMLAATIR DAGRWLDMPR DALARRIWED VARVSGANPE TIPAWQLVVE
PRAGFAAVPS QEMKRPAART RWTNLVLAGD WIATGLPATI EGAICSGQLA ADVLQTQ
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