| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4949 |
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| Symbol | |
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| ID | 4313840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1964473 |
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| End bp | 1965477 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152792 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_776832 |
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| Protein GI | 115359694 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0509972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGG TGCGAATCAT TGCGGCGACC GTCGCTGCCA GCACGGTGCT GAGCGGCTGC
GCGACCGGCC CGAACCGCAA CCCCAACGAC CCGCTCGAGC CGATGAACCG GGCGATGTAC
AAGTTCAACG ACACGGTCGA CACGAACATC GCCGTGCCGA TCGCGAAGGG TTACCAGAAG
ATCACGCCGA CGCCGATGCG CACCGCGATC AGCAACTTCT TCTCGAACCT CGGCGATCTC
GGCAACATGG CGAACAACCT GCTGCAGTTG CGCATCACCG ATGCGACGCA GGATCTGATG
CGCGTGGCGA TGAACTCGGT GTTCGGCGTC GCCGGCCTGA TCGACATCGC GACGCCGGCC
GGGCTGCCGA AGCATCACCA GGATTTTGGG CTGACGATGG CGCGCTGGGG CATGCCGTCC
GGCCCGTACC TCGTGCTGCC GGTGTTCGGG CCGAGCACGA TCCGCGACGG CGTCGGCCGC
GCGGTGGACG TCCGCTTCAA CCTGCTGAAC TACATCGAGC CGGCCGCGCG CAATCCGATG
TACATCGCGC AGTTCATCAG CGCGCGTTCG GATCTGCTCG GTGCGACCGA CCTGCTGAAG
CAGGCGGCGC TCGATCCGTA CTCGTTCGTC CGCGATGCGT ATCTGCAGCA GCGCAAGTCG
CTGACGTATC GCGGCCAGTC GGCGTCGGCC ACGCCGCCGA ACTACGCCGA GCCGGGCGAG
GCGGGCGCGG TGCCGGCGGC CGCTCCGGCC ATGCCGGGCT TGCCGAACTA CGAGGATCCG
GGTGAAGCGG GCGGCGCATC GGGCGCGGCG CCGAACAACG CGCCGGCCGC GCTGGGGTTG
CCGCAGTACG ACGATCCGGG TGCCGACGGT GCGATGCCTG CGAGCGCGCC TGCCGCGGCG
CCGGCGGCTG CATCCGCTGG TGCGACGACG GCGCCGGCCG CCAACGGCGC GCCGATCGCG
CCGGCGATGC CGACCCTGCC CGCGAGCACC CCGGCTGCGC AGTAA
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| Protein sequence | MNKVRIIAAT VAASTVLSGC ATGPNRNPND PLEPMNRAMY KFNDTVDTNI AVPIAKGYQK
ITPTPMRTAI SNFFSNLGDL GNMANNLLQL RITDATQDLM RVAMNSVFGV AGLIDIATPA
GLPKHHQDFG LTMARWGMPS GPYLVLPVFG PSTIRDGVGR AVDVRFNLLN YIEPAARNPM
YIAQFISARS DLLGATDLLK QAALDPYSFV RDAYLQQRKS LTYRGQSASA TPPNYAEPGE
AGAVPAAAPA MPGLPNYEDP GEAGGASGAA PNNAPAALGL PQYDDPGADG AMPASAPAAA
PAAASAGATT APAANGAPIA PAMPTLPAST PAAQ
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