Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4947 |
Symbol | |
ID | 4313838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1960920 |
End bp | 1961570 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638152790 |
Product | toluene tolerance family protein |
Protein accession | YP_776830 |
Protein GI | 115359692 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0489002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCGA TGCAATCCGC CGGCCCGTTT TTTCTCATCG AGTGCGATAT CCGTATGAAA CGTCATCTGT TTGCTTTCGT CGCGGCCGCC GCCGTGTCGG TTTCCGCTTT CGCGCAGAGC GCGCCGGTCG ACATCGTCCG CAATGCGGTC GAGGGCACCG TCAACGCGAT GAAGGCCGAT CCGGCTGCAC GCGGCGGCGA CATGGCGAAA ATCACGCAAG TCGTCGAGCA GCGCTTCCTG CCGGTGACGA ACTTCGAGCG CACGACGCGC ATCGCGGTCG GCGATGCCTG GAAGCAGGCG ACGCCGCAAC AGCAGCAGGA ACTCTACAAG CAGTTCAGGG TGCTGATGAC GCGCACCTAT GCCGCGTCGC TCGCGCAGCT CGGCAACCAG GACGCGAAGT TCTCGTTCAA GCCAGGCGGC GCGTCGGGTG CCGATGCGCT GGTGCAGTCG ACGGTCACGA CGCCGGGCGA CAGCCAGTCG GTCGGCTACC GGCTCGGCAA GGTCGGCAGC GACTGGAAGA TCTACGACAT CGACATGTCG GGCGCGTGGC TGATCCAGGT CTACCAGGGG CAGTTCAAGA GCCAGCTCGC AACGGGCGGC ATCGACGGCC TGATCGCGTA TCTGCAGAAG CACAACTCGC GGACGAACTG A
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Protein sequence | MQSMQSAGPF FLIECDIRMK RHLFAFVAAA AVSVSAFAQS APVDIVRNAV EGTVNAMKAD PAARGGDMAK ITQVVEQRFL PVTNFERTTR IAVGDAWKQA TPQQQQELYK QFRVLMTRTY AASLAQLGNQ DAKFSFKPGG ASGADALVQS TVTTPGDSQS VGYRLGKVGS DWKIYDIDMS GAWLIQVYQG QFKSQLATGG IDGLIAYLQK HNSRTN
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