| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4922 |
|---|
| Symbol | |
|---|
| ID | 4313813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1929004 |
|---|
| End bp | 1929933 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638152765 |
|---|
| Product | galactose 1-dehydrogenase |
|---|
| Protein accession | YP_776805 |
|---|
| Protein GI | 115359667 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.486884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGG AGATTTCGCT GGGCGTGATC GGAATCGGCA AGATCGCGCG TGACCAGCAT
TTGCCGGCGA TCGCCGCCGA ACCGGGCTTC GCGCTGACCG CCTGCGCGAG CCGTCACGCG
GAAGTCAACG GCGTGCGCAA TTATCCGGAG CTCGGTGCGC TGCTGGCAGC CGAGCCCGGG
CTCGAGGCGG TGTCGCTGTG CGCGCCGCCG CAGGTGCGCT ACGCGCAGGC ACGCGCGGCG
CTCGAAGCCG GCAAGCACGT GATGCTCGAG AAGCCGCCGG GCGCGACGCT CGGCGAAGTG
GCCGCGCTGG ACGCGCTCGC GCGCGAACGC GGCCTCACGC TGTTCGCGAC CTGGCATTCG
CGCTGCGCGA GCGCGGTGGA ACCGGCGCGC GCGTGGCTCG CGACGCGCAC GATCCGCGCG
GTGCAGGTGC GCTGGAAGGA AGACGTGCGG CGCTGGCATC CGGGGCAGCA GTGGATCTGG
GAGCCGGGCG GCCTCGGCGT GTTCGATCCC GGCATCAACG CGCTGTCGAT CGTCACGCGG
ATCCTGCCGC GCGAGCTCGT GCTGCGCGAA GCGACGCTCT ACGTGCCGAG CGACGTGCAG
ACGCCGATCG CGGCCGAACT CGATTGCGCC GATACGGAAG GCGTGCCCGT GCACGCGGAA
TTCGACTGGC GGCACGGCCC CGTCGAGCAA TGGGAGATCG CGGTCGACAC GTCGGACGGC
GTGCTCGCGA TCAGCCGCGG CGGCGCGCAG CTGTCGATCG CCGGCGAGCC GGTCGAGATC
GGCCCGCAGC GCGAGTATCC GGCGCTGTAT GCTCACTTCC GCGCGCTGAT CGCGCGCGGC
GAAAGCGACG TCGACGTACG GCCGTTGCGG CTCGTCGCCG ACGCATTTTT GTTCGGGCGG
CGCGTCGGGA CCGACGCGTT CGGCCGCTGA
|
|---|
| Protein sequence | MSKEISLGVI GIGKIARDQH LPAIAAEPGF ALTACASRHA EVNGVRNYPE LGALLAAEPG
LEAVSLCAPP QVRYAQARAA LEAGKHVMLE KPPGATLGEV AALDALARER GLTLFATWHS
RCASAVEPAR AWLATRTIRA VQVRWKEDVR RWHPGQQWIW EPGGLGVFDP GINALSIVTR
ILPRELVLRE ATLYVPSDVQ TPIAAELDCA DTEGVPVHAE FDWRHGPVEQ WEIAVDTSDG
VLAISRGGAQ LSIAGEPVEI GPQREYPALY AHFRALIARG ESDVDVRPLR LVADAFLFGR
RVGTDAFGR
|
|---|
| |