Gene Bamb_4916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4916 
Symbol 
ID4313807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1922607 
End bp1923437 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content66% 
IMG OID638152759 
Productp-hydroxycinnamoyl CoA hydratase/lyase 
Protein accessionYP_776799 
Protein GI115359661 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.931681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGT ACGACAACCG CTGGCAGACC GTTGAAGTGA ACGTGGAGGC CGGCATCGCG 
TGGGTGACGC TGAACCGTCC GGACAAGCGC AATGCGATGA GCCCGACGCT GAACCAGGAA
ATGCTGCAGG TGCTCGACGC GATCGAGTTC GACGACGACG CGAAGGTGCT GGTGCTGACC
GGCGCGGGCA GCGCATGGAC GGCCGGTATG GATCTGAAGG AATATTTCCG CGAGATCGAC
GGCGGCTCCG ACGCGTTGCA GGAAAAGGTG CGGCGCGACG CGTCGGAATG GCAGTGGCGC
CGTCTGCGGA TGTACAACAA GCCGACGATC GCGATGGTGA ACGGCTGGTG CTTCGGCGGC
GGGTTCTCGC CGCTCGTCGC GTGCGACCTC GCGATCGCGG CGGACGAAGC GGTGTTCGGG
CTGTCGGAGA TCAACTGGGG CATCCCGCCG GGCAACCTCG TCAGCAAGGC GATGGCGGAC
ACGGTCGGGC ATCGCCGCGC GCTGCACTAC ATCATGACCG GCGACACGTT CACCGGCGTC
GAAGCGGCGG AAATGGGCCT CGTGAACAGC AGCGTGCCGC TGGCCGGGCT GCGCGACGCG
ACGATCGCGC TCGCCGCACG GCTGATGGAC AAGAACCCGG TCGTGCTGCG CGCGGCGAAG
CATGGCTTCA AGCGTTCGCG CGAGCTCACG TGGGAGCAGT GCGAGGATTA TCTGTATGCG
AAGCTCGACC AGGCGCAGTT GCGCGACCCG GAGCGCGGCC GCGAGCAGGG GCTGAAGCAG
TTCCTCGACG ACAAGGCAAT CAAGCCGGGC CTGCAGGCAT ACAAGCGCTG A
 
Protein sequence
MSKYDNRWQT VEVNVEAGIA WVTLNRPDKR NAMSPTLNQE MLQVLDAIEF DDDAKVLVLT 
GAGSAWTAGM DLKEYFREID GGSDALQEKV RRDASEWQWR RLRMYNKPTI AMVNGWCFGG
GFSPLVACDL AIAADEAVFG LSEINWGIPP GNLVSKAMAD TVGHRRALHY IMTGDTFTGV
EAAEMGLVNS SVPLAGLRDA TIALAARLMD KNPVVLRAAK HGFKRSRELT WEQCEDYLYA
KLDQAQLRDP ERGREQGLKQ FLDDKAIKPG LQAYKR