Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4913 |
Symbol | |
ID | 4313804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1917781 |
End bp | 1918986 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638152756 |
Product | putative 3-hydroxyphenylpropionic transporter MhpT |
Protein accession | YP_776796 |
Protein GI | 115359658 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.283343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.716613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACTT ACGTTGCCGA AAAATCCACG GTCGCGACCA CGCTCGCGCT GTGTTTCGCG GTCGCCCTCC TCGAAGGGCT CGACCTGCAG TCGGTCGGGG TCGCCGCGCC GCGCATGGCG CATGAGTTCG GGCTGACCGT GTCGCAGATG GGCATCGCGT TCAGCGCGGG CACCTTCGGG CTGCTGCCGG GCGCGATGCT CGGCGGGCGG CTCGCCGACC GGATCGGCCG CAAGCGCGTG CTGATCGCGT CGGCCGTGCT GTTCGGACTG CTGTCGATCG CGACCGCGCA GGTGTCGAGC TTCTGGATGC TCGTCGTCGT GCGCGTGCTC ACCGGCATCG GCCTCGGCGG CGCGATGCCG AACCTGATCG CGCTGTCGTC CGAAGCGGTC GAGCCGCGCT TGCGCAGCAG CGCGGTGGCG ACGATGTACT GCGGCATTCC GTTCGGCGGC GTGATCGCGT CGCTGATCGG CGTGCTGCTC GCCGGCGACA CCGAATGGCG GCACATCTTC TACGTCGGCG GCGCCGGGCC GCTGCTGCTC GTGCCGCTGC TCGCGTGGTG CCTGCCGGAA TCGCGCGCGT ATCTCGACGT CGCCGGCACG CCGGCCGCAC GCACCAGCGT CGCGCACACG CTGTTCGGCG ACGGCCGCAC GACGTCGACG TTCGCGCTGT GGATCAGCTA CTTCTGCACA CTGATCGTCC TCTACTTCCT GCTGAACTGG CTGCCGTCGC TGATGGCCGC GCGCGGGCTC GACCGTGCAC ATGTCGGCCT CGTGCAGATC GCGTTCAACG TCGGCGCGGG GCTCGGCGCG CTCGGCATCG GCGCGGCGCT CGACCGGATG CGCGCGTCGC GCGTGGTCGG CGGCATGTAT GTCGGGATCG TGCTGTCGCT TGCCGCGCTC TCGGCCGCGC CCGGCTTCGC GTCGCTCGCG GCGGCCGCGT TTGCCGCCGG GATGTTCGTG GTCGGCGGGC AGTCGGTGCT GTATGCGCTC GCGGCGATCT ATTACCCGAC CGCGATGCGC GGCACGGGCG TCGGCGCGGC GGTGGCGGTC GGGCGGCTCG GTTCCGTCGT CGGGCCGCTC GCGGCCGCGA CGCTGCTGGC CGCCGGCCGC AGCGCGCCGG TCGTGATCGG CGCGAGCATC CCCGTCACGC TGGTCGCGGC CGTCGCCGCG CTGGTGCTGA TTCGCCGCCC GCAAGCCGGC GACTGA
|
Protein sequence | MNTYVAEKST VATTLALCFA VALLEGLDLQ SVGVAAPRMA HEFGLTVSQM GIAFSAGTFG LLPGAMLGGR LADRIGRKRV LIASAVLFGL LSIATAQVSS FWMLVVVRVL TGIGLGGAMP NLIALSSEAV EPRLRSSAVA TMYCGIPFGG VIASLIGVLL AGDTEWRHIF YVGGAGPLLL VPLLAWCLPE SRAYLDVAGT PAARTSVAHT LFGDGRTTST FALWISYFCT LIVLYFLLNW LPSLMAARGL DRAHVGLVQI AFNVGAGLGA LGIGAALDRM RASRVVGGMY VGIVLSLAAL SAAPGFASLA AAAFAAGMFV VGGQSVLYAL AAIYYPTAMR GTGVGAAVAV GRLGSVVGPL AAATLLAAGR SAPVVIGASI PVTLVAAVAA LVLIRRPQAG D
|
| |