Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4895 |
Symbol | |
ID | 4313786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1898131 |
End bp | 1898868 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638152738 |
Product | histidine utilization repressor |
Protein accession | YP_776778 |
Protein GI | 115359640 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.108836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACGA AGGCCACCGC ACCGTTCCAG CAGATCAAGA CGCTCGTTCG CCAGAAGGTC GACGCGAGCG AGTGGCGCCC GGGCGACCGC ATTCCGTCCG AACTCGATCT CGCCGCGCAA TTCGGCGTCG CGCGCATGAC GGTCAACCGC GCGCTGCGCG AGCTGACCGA GGAAGGCGTG CTCAAGCGCA TCGCGGGCGT CGGCACCTTC GTCGCCGAAG TGAAGCCGCA GTCGAACCTG CTGATGATCG CGCACATCCG CGACGAGATC CGCGCGCGCG GACACGAATA TCGCTGCCGC GTGCTCAGCC AGTCGCGCGA ACCCGCGTCG TTCGACGTCG CGGCCGCGTT CGGGCTGGCG GTCAACACGC CGGTCTTTCA CGTGGTGTGC GTGCACGAGG AAAACGGCCG CCCGATCCAG CTCGAGGATC GCTACGTGAA TCCGGCCGCC GCACCCGAAT TCATCGATCA GGACTTCCAG GCCGAGCCGC CGTCCGAATA CCTGTTCAAC AACGTGTCGC ACTACGAACT GGAGATCGAG CACGTCGTCG ACGCGGCGCT GCCGACGAGC GAACAGGCGC GGCTGCTCGA CATGCGCGCC GACGAGCCGT GTCTCACCCT CACGCGCCGC ACCTGGACGA ACGGGCTGCC CGTCACGTTC GTGCACTTCC TGCATCCGGG CAACCGCTAC CGGCTCGGCT CGCGCTTCAA GCCGGGCGCC GGACGGCACC AGACCTGA
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Protein sequence | MVTKATAPFQ QIKTLVRQKV DASEWRPGDR IPSELDLAAQ FGVARMTVNR ALRELTEEGV LKRIAGVGTF VAEVKPQSNL LMIAHIRDEI RARGHEYRCR VLSQSREPAS FDVAAAFGLA VNTPVFHVVC VHEENGRPIQ LEDRYVNPAA APEFIDQDFQ AEPPSEYLFN NVSHYELEIE HVVDAALPTS EQARLLDMRA DEPCLTLTRR TWTNGLPVTF VHFLHPGNRY RLGSRFKPGA GRHQT
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