Gene Bamb_4889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4889 
Symbol 
ID4313780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1893081 
End bp1893791 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID638152732 
Producthypothetical protein 
Protein accessionYP_776772 
Protein GI115359634 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.022245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CGCCGGATAT GCCCACGCCA CGCGCCTTGC GCGAACTCAC GCCTCTCGAG 
GCCCGCATTC TCGGGGTGCT CGTCGAGAAG CAGCACACGG TGCCGGACAC CTATCCGCTG
TCGCTGAACG CGCTGACCGC GGGCTGCAAT CAGAAAACCG CACGCTCGCC GGTGATGAAC
GTCAGCGAGG ACGAGGTCAC GACCGCGATC GACAGCCTCA AGCACCTGAG CCTCGTGATG
GAGGGCAGCA GCAGCCGCGT GCCGCGTTTC GAGCACAACA TGAATCGCGT GCTCGGCATC
CCGAGCCAGG CGATCGCGCT GCTGACGATC CTGCTGCTGC GCGGCCCGCA GACGGCCGCC
GAACTGCGCC TGAACAGCGC GCGCCTGCAC GGCTTCGCGG ACATCTCGTC GGTCGAGGCC
TTCCTGGACG AACTCGCGGC GCGTGCGCAG CCGCTCGTGA TCCGGCTGCC GCGTGCGGCC
GGTGCGCGCG AGAACCGCTG GCTGCACCTG ATGTGCGGCG AGGTGAACGT CGCAGACTTC
GTCGGTCCGG ATACCGGTGG CGGCACGGAT TCCGTTCCGC CGTCCGAGTT CGAGGCGCTG
AAGGCCGAGC AGAAGCGGCT TGCGGATGAA GTGGCGCGGC TGAACGCGCT CGTTCAGCGG
ATGGCGACCG AACTCGGGAT CGACGTCGAC GCGCCGGGCG ACGCGGGCTG A
 
Protein sequence
MNTTPDMPTP RALRELTPLE ARILGVLVEK QHTVPDTYPL SLNALTAGCN QKTARSPVMN 
VSEDEVTTAI DSLKHLSLVM EGSSSRVPRF EHNMNRVLGI PSQAIALLTI LLLRGPQTAA
ELRLNSARLH GFADISSVEA FLDELAARAQ PLVIRLPRAA GARENRWLHL MCGEVNVADF
VGPDTGGGTD SVPPSEFEAL KAEQKRLADE VARLNALVQR MATELGIDVD APGDAG