| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4888 |
|---|
| Symbol | |
|---|
| ID | 4313779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1892574 |
|---|
| End bp | 1892996 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638152731 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_776771 |
|---|
| Protein GI | 115359633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0225387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG CATTCGCCGC GTTGCTGCTG TGCATCGCAT TGCCCGCGTC GGCCGAGGTC
AGCACGGAAG TGCTGTGCTT CAGGACGACC GGCGACAAAC CCGTGCGATT CGAGCTGCGC
ACGTATTACG ACGACGTGGC CAAGTGGCAA GGCGGCGTCG TCCGGTATGC GAAATCGAAG
TCGGCCATCC CGCTGCTGTT CAAGCACGAG GATCACGAGG AGCTCGCGGA AGGCCGCCCG
TACCAGTACA CGACAACGTG GTGGGAAATG GTCGACGGCA AGATCAACGG CGAATATGAA
ATGATGAGCC AGGGTGCGAT CGTCTATTCG ATGACGTACA CCCATGCGCG TACCGGCAAG
AAGACCGATT TCACGTGGGC GCAGGACGTC GATGCGTCCG CGAAGACGGG GTGCCGCTGG
TGA
|
|---|
| Protein sequence | MKKAFAALLL CIALPASAEV STEVLCFRTT GDKPVRFELR TYYDDVAKWQ GGVVRYAKSK
SAIPLLFKHE DHEELAEGRP YQYTTTWWEM VDGKINGEYE MMSQGAIVYS MTYTHARTGK
KTDFTWAQDV DASAKTGCRW
|
|---|
| |