| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4886 |
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| Symbol | |
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| ID | 4313777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1890599 |
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| End bp | 1891729 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152729 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_776769 |
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| Protein GI | 115359631 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0559628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACC TCGACAATCC TTCCCACGAT CGCGAGGTAG GCAGCGCCGA CGCGACGCAG
GACACCACGC GCATCGACGA CGTCCGCATC GGCGCCGTGC GTCCGCTGAT TTCCCCGGCG
CTGCTGCAGG ACGAGCTGCC GGTGCCCGCC TCCACGCAGA CACTCGTCGA GGACACGCGC
CGCGCGATCG GCGACATCCT GCATGGCCGC GACGACCGGC TGCTGCTCGT CGTCGGCCCG
TGCTCGATCC ACGACCACGA CCAGGCGCTC GACTACGCAC GTCGCCTGAA GGCCGCCGCC
GATGCGCTGA AGGATGACCT GCTGATCACG ATGCGCGTGT ACTTCGAGAA GCCGCGCACG
ACGGTCGGCT GGAAGGGGTA CATCAACGAT CCGCGCCTGG ACGGCAGTTT CCGCATCAAC
GAAGGGCTGC GCGCCGCGCG GCAGCTGCTG CTCGACATCA ACGCGCTGGG CCTGCCGGCG
TCGACCGAAT TCCTCGACCT GCTGAGCCCG CAATACATTG CCGACCTGAT CGCGTGGGGC
GCGATCGGCG CGCGCACGAC CGAGAGCCAG AGCCATCGCC AGCTCGCGTC GGGGCTGAGC
TGCCCTATCG GCTTCAAGAA CGGCACCGAC GGCGGCGTGC AGGTGGCGTC GGACGCGATC
GTCGCCGCGC GCGCGAGCCA CGCGTTCATG GGGATGACGA AGATGGGGAT GGCCGCGATC
TTCGAGACGC GCGGCAACGA CGATGCGCAC GTGATCCTGC GCGGCGGCAA GAACGGGCCG
AACTACGACG CCGAGCACGT CGAGGCGAGC TGCGCGGTGC TGCGCAAGAG CGGGTTGCGC
GAGCAGGTGA TGGTCGATTG CTCGCATGCG AACTCGAACA AGTCGCATGA GCGGCAGATC
GACGTCGCGC AGGATCTCGC ACGGCAGTTG GGGCAGGGCG AGCACCGGAT CGTCGGCGTG
ATGGTGGAGA GCCATCTCGA GGCCGGGCGC CAGGATCTGA AGCCGGGCGT GCCGTTGCAG
TACGGCGTGT CGATCACCGA TGCGTGCCTG AGCTGGTCGC AGACCGAGCC GGTGCTCGAC
GTGCTGGCCG AGGCGGTGCG GCATCGCCGG GTGTATTCGC GCAACGCGTG A
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| Protein sequence | MQNLDNPSHD REVGSADATQ DTTRIDDVRI GAVRPLISPA LLQDELPVPA STQTLVEDTR
RAIGDILHGR DDRLLLVVGP CSIHDHDQAL DYARRLKAAA DALKDDLLIT MRVYFEKPRT
TVGWKGYIND PRLDGSFRIN EGLRAARQLL LDINALGLPA STEFLDLLSP QYIADLIAWG
AIGARTTESQ SHRQLASGLS CPIGFKNGTD GGVQVASDAI VAARASHAFM GMTKMGMAAI
FETRGNDDAH VILRGGKNGP NYDAEHVEAS CAVLRKSGLR EQVMVDCSHA NSNKSHERQI
DVAQDLARQL GQGEHRIVGV MVESHLEAGR QDLKPGVPLQ YGVSITDACL SWSQTEPVLD
VLAEAVRHRR VYSRNA
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