Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4883 |
Symbol | |
ID | 4313774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1886306 |
End bp | 1886926 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638152726 |
Product | hemolysin III family channel protein |
Protein accession | YP_776766 |
Protein GI | 115359628 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0623487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.221133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATGTCG GTGAGCGTTT CAACAGCATT TCCCATCTCG TCGGCGCGGT GTTGTCGGTG GCAGGGCTGG TCGCGCTGGT GACGATGGGC GCGCTCGATC GCGATCCCTA CAAGATCGTG AGCTTCAGCG TGTACGGCGC GATGCTGATC CTGCTGTACG CGATCTCGAC GCTGTATCAC AGCGTGCGCA ACCCGCGGCT CAAGGCGATC CTGCAGAAGT GCGACCATTC GGCCATTTAT CTGCTGATCG CGGGCAGCTA CACGCCCTTC GCGCTCGTCA CGCTGCGCGG CCCGTGGGGC TGGTCGCTGT TCGGCGTGAG CTGGGGGCTC GCCGCATTCG GGATCGCGCA GGAGCTCACG CTCGGACGGC GCACGCGCAT CGTGTCGATG GTGCTGTACG TGCTGATGGG CTGGCTCGCG CTCGTCGCGA TCCGCCCGCT GATCCATGCG TTGCCGCCCG TGGGGACTGC CTGGCTCGTG GCCGGCGGCG TCATCTACAG CGCGGGCATC TACTTCTTCA TCAACGACGA GCGCATCCGC CACGGGCACG GTATCTGGCA CCTGTTCGTG CTGGCCGGCA GCCTGTGCCA GTTCGTCAGT GTCGCTATGT ACGTTGCGTG A
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Protein sequence | MHVGERFNSI SHLVGAVLSV AGLVALVTMG ALDRDPYKIV SFSVYGAMLI LLYAISTLYH SVRNPRLKAI LQKCDHSAIY LLIAGSYTPF ALVTLRGPWG WSLFGVSWGL AAFGIAQELT LGRRTRIVSM VLYVLMGWLA LVAIRPLIHA LPPVGTAWLV AGGVIYSAGI YFFINDERIR HGHGIWHLFV LAGSLCQFVS VAMYVA
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