Gene Bamb_4881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4881 
Symbol 
ID4313772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1885379 
End bp1885732 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content65% 
IMG OID638152724 
Productaromatic ring-cleaving dioxygenase-like protein 
Protein accessionYP_776764 
Protein GI115359626 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3805] Aromatic ring-cleaving dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.290498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.201016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA TCGACACCAC CGCCATCGAC AGTTGGCACG CACACGTCTA CTTCGACGCC 
GCGAGTCGCG ACGCGGCCTG GGCGTTTCGC CTCGTCGTCG AAGAACGGTT CGGCGCGATC
ATCGAGCTCG GCCGCTTTCA CGAACGCCTC GTCGGCCCGC ATCCTGCGTG GTCGTATCAG
ATCGCGTTCG ACGCCGCGCG GTTCGACACC ATCGTGCCGT GGCTCGTGCT GAATCACGGT
GCGCTCGACA TCTTCCTGCA TCCGAACACG AACGACGAAC TGCGCGACCA CCGCGACAGC
GCGGTGTGGA TCGGCAAGTC GCACGAACTG AATCTCGGCG CGCTGGGAGG CTGA
 
Protein sequence
MSDIDTTAID SWHAHVYFDA ASRDAAWAFR LVVEERFGAI IELGRFHERL VGPHPAWSYQ 
IAFDAARFDT IVPWLVLNHG ALDIFLHPNT NDELRDHRDS AVWIGKSHEL NLGALGG