| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4876 |
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| Symbol | ispH |
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| ID | 4313767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1881094 |
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| End bp | 1882035 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152719 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_776759 |
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| Protein GI | 115359621 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCA TCCTTGCCCA GCCCCGCGGC TTCTGTGCGG GGGTTGTCCG CGCCATCGAA
ATCGTCGATC GCGCGCTGCA ACAGCACGGC GCGCCGGTCT ATGTGCGTCA TGAGATCGTG
CATAACCGGC ATGTCGTCGA AAATCTGCGT AATAAAGGGG CACGATTCGT TGAGGAACTC
GACGAGGTGC CGCACGGCGC CGTGGCGATC TTCAGCGCGC ACGGTGTCGC CCAGACGGTC
GAACGCGACG CCGAAACGCG CGGGCTCGAC GTGCTGGACG CCACGTGCCC GCTCGTCACG
AAGGTGCACG TGCAGGGCCG CCAGTACGTC GCGGCGGGCC GCCGGCTGAT CCTGATCGGC
CACGCGGGCC ATCCGGAAGT CGAAGGCACG ATCGGCCAGA TTCCGGCCGA GGTGATCCTC
GTGCAGAGCG AGGCAGAAGT CGATACGCTG ACGCTGCCGG TCGATACGCC GGTCGCGTAC
GTGACGCAGA CCACCCTGTC GGTCGACGAC ACGCGCGGCA TCATCGAAGC GCTGCAGCGC
CGGTTCACCG ACATCGTCGG CCCGGACACG CGCGACATCT GCTACGCGAC GCAGAACCGC
CAAGCCGCCG TGCGCGAGTT GAGCGGCCAG GTCGACGTGC TGCTGGTCGT CGGTGCGACG
AACAGCTCGA ACTCGAACCG CCTGCGCGAG ATCGGCACCG AAAGCGGCGT GCCGAGCTAT
CTCGTCGCCG ACGGCTCGGA AGTGAAGCCC GAATGGTTCG CGGGCGTGCA GACGGTCGGC
CTGACCGCCG GCGCGTCGGC ACCCGAGGAA ATGGTTGAGG ATGTAATCGG CGCGCTGCGC
GCGCTGGGGC CCGTCGATGT CACGACGATG GCGGGCCGTG AAGAAAAAGT CGAATTCAAG
TTGCCGGCGA AGCTTACGCA AGCTGTCGCC CGCGAAGTTT AA
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| Protein sequence | MRVILAQPRG FCAGVVRAIE IVDRALQQHG APVYVRHEIV HNRHVVENLR NKGARFVEEL
DEVPHGAVAI FSAHGVAQTV ERDAETRGLD VLDATCPLVT KVHVQGRQYV AAGRRLILIG
HAGHPEVEGT IGQIPAEVIL VQSEAEVDTL TLPVDTPVAY VTQTTLSVDD TRGIIEALQR
RFTDIVGPDT RDICYATQNR QAAVRELSGQ VDVLLVVGAT NSSNSNRLRE IGTESGVPSY
LVADGSEVKP EWFAGVQTVG LTAGASAPEE MVEDVIGALR ALGPVDVTTM AGREEKVEFK
LPAKLTQAVA REV
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