| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4875 |
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| Symbol | |
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| ID | 4313766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1879474 |
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| End bp | 1880661 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638152718 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_776758 |
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| Protein GI | 115359620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR03469] hopene-associated glycosyltransferase HpnB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.596859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGG CGATTACTTT CCTGGTGTCC GGCCTGTCGC TGCTGATCTG GATCGTGCTG
CTCGTCGCGC GCGGCGGTTT CTGGCGCGCG CGGCCCGCGC GGGCGCTGCC GCCGCAGGCG
CGCGGCGCGG CGGCCGAGGC TGGCTGGCCG GCCGTCGTCG CGGTCGTGCC GGCGCGCAAC
GAGGTCGACG TGATCGCCCA GGCGGCGACG TCGTTGCTCG AGCAGGACTA TCCGGGCGAT
TTTCATTTGA TCATCGTCGA TGACCACAGC GACGACGGCA CCGCCGACGC GGCCCGTGCG
GCCGCGCTCG CGATCAACCG CGCCGAGCGC CTGACGGTGC TGGCTGCGAA GCCGCTGCCG
TCCGGCTGGT CGGGCAAGGT ATGGGCGCAG TCGCAGGGCA TCGCGGCGGT GCGCACGCTC
GGGCTGCCGG CCGACTACCT GCTGCTGACG GATGCCGACA TCGGCCATCC GCCCGACGCC
GTCGCCCAGC TCGTCACGCG CGCGCAGGCC GAACAGCGCG ATCTCGTGTC GCTGATGGTG
CGGCTGCGCT GCGATTCGTT CTGGGAGAAG GCGCTGATTC CGGCGTTCGT GTTCTTCTTC
GCGAAGCTCT ATCCGTTCTC GTGGATCAAC AATCCGCGCA ACCGGACGGC CGGCGCCGCG
GGCGGCTGCA TGCTGGTCAA GCGCAGCGCG CTCGAGGAGG CGGGCGGGAT CGAATCGATC
CGCGGCGCGC TGATCGACGA CTGCAGCCTC GCCGCGCAGA TCAAGCATCG CGGCAGCGGC
CGGCATCCGA TCCGGCTCGA TCTGGCCGAT CGCAGCGTGT CGCTGCGTCC GTACGACAGC
TGGCGCGACA TCTGGAACAT GATCGCGCGC ACCGCGTTCA CGCAGCTCCA TTATTCGCCG
CTGCTGCTCG CCGGCACGCT GCTCGGGATG ACGATCATCT ACCTCGTGCC GCCCGTCGCC
GCGCTGGCGT ACGGCGCGCG CGCGTGGCCG GCGTGGCTCG CGTGGGCGTC GATGTGCACC
GCGTATGCGC CGATGCTGCG CTACTACCGG CGCTCGCCGC TGTGGGCGCC CGCGTTGCCG
CTCGTCGCGC TGTTCTACGT CGGTGCGACG TTCGCGTCCG CGTGGCGCTA TTGGCGCGGC
AAGGGCGGCC AGTGGAAGGC GCGGGTGCAG GCGCCGGTGG AGCGTTGA
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| Protein sequence | MMLAITFLVS GLSLLIWIVL LVARGGFWRA RPARALPPQA RGAAAEAGWP AVVAVVPARN
EVDVIAQAAT SLLEQDYPGD FHLIIVDDHS DDGTADAARA AALAINRAER LTVLAAKPLP
SGWSGKVWAQ SQGIAAVRTL GLPADYLLLT DADIGHPPDA VAQLVTRAQA EQRDLVSLMV
RLRCDSFWEK ALIPAFVFFF AKLYPFSWIN NPRNRTAGAA GGCMLVKRSA LEEAGGIESI
RGALIDDCSL AAQIKHRGSG RHPIRLDLAD RSVSLRPYDS WRDIWNMIAR TAFTQLHYSP
LLLAGTLLGM TIIYLVPPVA ALAYGARAWP AWLAWASMCT AYAPMLRYYR RSPLWAPALP
LVALFYVGAT FASAWRYWRG KGGQWKARVQ APVER
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