| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4873 |
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| Symbol | |
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| ID | 4313764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1876852 |
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| End bp | 1877859 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638152716 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_776756 |
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| Protein GI | 115359618 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA CCTCCCGCGA TCTCGTTCTC GTCACCGGCG CGTCCGGTTT CGTCGGCTCG
GCCGTCGCGC GCATCGCGCA GCAGAAAGGC TATGCGGTGC GCGTGCTGGT GCGCCCGACC
AGCCCGCGCA CGAACGTCGC GGATCTCGAC GCCGAGATCG TCACCGGCGA CATGCGCGAC
GAGGCTTCGA TGCGCGCCGC GCTGCGCGGC GTGCGCTACC TGCTGCACGT GGCGGCCGAC
TACCGGCTGT GGGCGCCGGA TCCGGACGAG ATCGAGCGCG CGAACCTCGA AGGCGCGGTC
GCGACGATGC GCGCGGCGCG TGCCGAAGGC GTCGAGCGGA TCGTCTACAC GAGCAGCGTC
GCGACGCTGA AGGTCACGAG CGCCGGCGAT CCGTCCGACG AAAACCGGCC GCTGACCGCC
GAGCAGGCGA TCGGCGTGTA CAAGCGCAGC AAGGTGCTGG CCGAGCGCGC GGTCGAGCGG
ATGATCGCCG ACGAAGGGTT GCCGGCCGTG ATCGTCAACC CGTCGACGCC GATCGGCCCG
CGCGACGTGA AGCCGACGCC GACCGGCCGC ATCATCGTAG AAGCCGCGCT CGGCAAGATT
CCCGCGTTCG TCGATACCGG CCTGAACCTG GTGCACGTCG ACGATGTCGC GCACGGCCAC
TTCCTCGCGC TCGAGCGCGG CCGGATCGGC GAGCGCTACA TCCTCGGCGG CGAGAACCTG
CCGCTGCAGC AGATGCTGGC CGACATCGCG CAGATGACGG GCCGCAAGGC GCCGACCATC
GCGCTGCCGC GCTGGCCGCT CTACCCGCTC GCGCTCGGCG CGGAGGCCGT CGCGAAGTTC
ACGAAGAAGG AGCCGTTCGT GACCGTCGAC GGGCTGCGGA TGTCGAAGAA CAAGATGTAT
TTCACGTCCG CGAAGGCCGA GCGCGAGCTT GGCTATCGCG CGCGTCCGTA CCGCGAAGGG
CTGCGCGACG CGCTCGACTG GTTCGGCTCG GCGGGCTACC TGAAATAG
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| Protein sequence | MTDTSRDLVL VTGASGFVGS AVARIAQQKG YAVRVLVRPT SPRTNVADLD AEIVTGDMRD
EASMRAALRG VRYLLHVAAD YRLWAPDPDE IERANLEGAV ATMRAARAEG VERIVYTSSV
ATLKVTSAGD PSDENRPLTA EQAIGVYKRS KVLAERAVER MIADEGLPAV IVNPSTPIGP
RDVKPTPTGR IIVEAALGKI PAFVDTGLNL VHVDDVAHGH FLALERGRIG ERYILGGENL
PLQQMLADIA QMTGRKAPTI ALPRWPLYPL ALGAEAVAKF TKKEPFVTVD GLRMSKNKMY
FTSAKAEREL GYRARPYREG LRDALDWFGS AGYLK
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