Gene Bamb_4870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4870 
Symbol 
ID4313761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1873900 
End bp1875024 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content72% 
IMG OID638152713 
Producthypothetical protein 
Protein accessionYP_776753 
Protein GI115359615 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGA GCATGCCGCC CGTCGCCGCG GCTGCGCCGG CGCGCGGCGG CCGCCTGATC 
GAAGTCGATT TCTTCCGCGG GATCGTGCTG CTGATGATCG TCGTCGATCA CATCAGTGCG
AGCGTGCTGT CGCGCGTGAC GCTCCACGCG TTCGCGCTGT GCGACGCGGC CGAGGTGTTC
GTCTTTCTCG GCGGCTTCGC GACCGCGAGC GCCTACGGCG CGATCGCCGA CCAGCACGGC
GCGCGCGCCG CGCAGCGGCG GTTCGTGCAC CGCGCGATGC AGATCTATCG CGCGTTTCTC
GCGACGTCGA CGCTGATGCT CGTCGTGTCC GCCGTGCTCG ACCATTACGG GATCGACGCG
CCGAACCTCG CGCTCGACGA CGTCAGCGTG ATGCTCGCGT CGCCGCTCAC GGGCGCGGCC
GAGCTGCTCA CGTTCCAGCG CCAGCCGTAT CTCGCGTCGG TGCTGCCGAT GTACGTGCTG
TTCGCGCTCG CGTCGCCGGT CGTCGTGCCG TTCGCGCGCC GCCACCCGTG GCTGCTCGTC
GCGTTCGGCG CGGCGTCGTG GCTCGCGGCC GGCTGGCTCG GCCCCGAACT GCTGGACACC
GATGCGTTCC GCTGGAGCTT CAACCCGTTC GCGTGGCAGC TGATGTTCGT CGGCGGCGTG
CTCGCGCGCA GCCAGCCGTT CTATCGGCAC GTCGCGCTCG GGCGCTGGAG TGCCGCGGCG
ACCGGCGTCG CGTGTGCGAT CGTGCTCGGC TGCGCGAGCT ACAAGCTGTT CTCGGGGCTG
CCGGTGCCGG AAGGCGTGCT CAAGCGCGAT CTCGCGCTGC CGCGCATCGT GAGCTTCGTG
GCGCTCGCGT GGCTGATGGC CGACTGCGTG CGCTACGGCT GGATCGCGCG CATTGCGCAC
GCCGTGCAGC CCGTGGTCGC GGTGGGCCGG CGCGGCCTGA TCTGCTTCGT CGCGGGCGCG
GCGATCTCGC TCGTCATCGA TTCGCTGCTG CATCCGGTCG CGAACGGCGC CGAGCTGCGG
CATATCGGCG TGGGGCTCGC GGCCGACGCG TGCGCGGTGG GGCTGATGAT GGCGGTGGCC
GGATCGGGAT CGTGGTTCGC GCGCTGGCGC GGCGCGGCCG CATGA
 
Protein sequence
MSLSMPPVAA AAPARGGRLI EVDFFRGIVL LMIVVDHISA SVLSRVTLHA FALCDAAEVF 
VFLGGFATAS AYGAIADQHG ARAAQRRFVH RAMQIYRAFL ATSTLMLVVS AVLDHYGIDA
PNLALDDVSV MLASPLTGAA ELLTFQRQPY LASVLPMYVL FALASPVVVP FARRHPWLLV
AFGAASWLAA GWLGPELLDT DAFRWSFNPF AWQLMFVGGV LARSQPFYRH VALGRWSAAA
TGVACAIVLG CASYKLFSGL PVPEGVLKRD LALPRIVSFV ALAWLMADCV RYGWIARIAH
AVQPVVAVGR RGLICFVAGA AISLVIDSLL HPVANGAELR HIGVGLAADA CAVGLMMAVA
GSGSWFARWR GAAA