| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4868 |
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| Symbol | |
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| ID | 4313759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1871994 |
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| End bp | 1873517 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152711 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_776751 |
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| Protein GI | 115359613 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCACG CACCTGTTTC CCAAACCCGA TCGTTTACGA CGGTCTTCCT CATCGAAATG
TGGGAGCGCT TCGGCTACTA CGGCATGGCC GCGCTTCTGG TCCTCTTCAT GGTCGACCGG
CTCGGTTTCA CCGACAGCCA TGCGAACCTG ACCTGGGGCG CGTTTACCGC GCTCGTCTAC
GCGTCGCCGT CGATCGGCGG CTGGATCGGC GACAAGGTGC TCGGCGCCCG TCGCACGATG
ATCATCGGCG CGGCCGTGCT GTGCGCCGGC TACCTGATGC TGGCGGTGCC GAACGACGCG
CTGGCGTACA TGTACGCATC GCTCGGCGTG ATCGTCGTCG GCAACGGCCT GTTCAAGGCC
AACGCGGCGA ACCTCGTGCG CCGCATCTAC GAAGGCGACG ATGCGCGCAT CGACAGCGCG
TTCACGATCT ACTACATGGC GGTCAACATC GGCTCGACCG TGTCGATGCT CGCGACGCCG
TGGATCAAGG ATCACTGGGG CTGGCACACC GCGTTCGCGG TCTGCTGCGG CGGCATGCTG
CTCGCGATCC TGAACTTCAT GCTGATGCAC CGCACGCTCG CGCACATCGG CTCGCAGCCC
GACGACGAAC CGATCCGCTG GAAGCGCCTC GGCGGCGTGG CGGCAGGCGG CGTCGCGCTC
GCGCTGATCA CGCTGTACGT GCTGCAGCAC AAGCAGCTCG CGGTCGCGAG CGTGTGGACG
GCCGCGTTCG CGATCCTGGC GATCTTCGCG TACATGATCG CGAAGTCGGA GCGTTCGGAG
CGGGCGGGCC TGATCGCGGC GCTGGTGCTG ATCGGCCAGG TGATCCTGTT CTTCATCTTC
TACGTGCAGA TGTCGACGTC GCTGACGCTG TTCGCGCTGC GCAACGTCGA TCCGCGCTTC
ATCCTGTTCG GCACGACGCT GTTCACGTGG AGCGCCGCGC AATTCCAGGC ACTGAACCCG
ATCTGGATCA TGATGCTGAG CCCGCTGCTC GTGTGGATCT ACAACGCGTT CTCGAAGAGC
GGCCGTGACC TGCCGGTCGC GGCGAAGTAC GCATTCGGCT TCGGCGCGGT GGCGGCCGGC
TACCTGGTGT TCACGATCAG CGGCCGCTAC GCGGTGGACG GCCGCGTGTC GTCGTGGTTC
ATGGTGTGGG GCTACGGCCT CTACTCGCTC GGCGAACTGC TGGTGAGCGG CCTCGGCCTC
GCGATGATCG CCCGCTACGT GCCGGCGCGC ATGAGCGGCT TCATGATGGG CGCGTATTTC
GTCGCGACGG GTGTGTCGCA GTATCTGGGC AGCGTCGTCG CGAACTTCGC GCAGATGCCG
TCGCACGACC TGCCGGCCAC CGAATCGCTG CCGCTCTATC TTTCGCTGTT CGAGAAGCTC
GGCTGGCTCG CCGCGATCGG CATGCTGCTG GCGCTGCTGC TGCTGCCGAT GATGAACCGC
CTGTCGCGCC AGCATCAGCG CTGCGCGGAC GAGCGCCGCG AGGAAGAAGC GGTGCAGGCG
CAGGCGATGG CCTCGGCTCA GTAA
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| Protein sequence | MMHAPVSQTR SFTTVFLIEM WERFGYYGMA ALLVLFMVDR LGFTDSHANL TWGAFTALVY
ASPSIGGWIG DKVLGARRTM IIGAAVLCAG YLMLAVPNDA LAYMYASLGV IVVGNGLFKA
NAANLVRRIY EGDDARIDSA FTIYYMAVNI GSTVSMLATP WIKDHWGWHT AFAVCCGGML
LAILNFMLMH RTLAHIGSQP DDEPIRWKRL GGVAAGGVAL ALITLYVLQH KQLAVASVWT
AAFAILAIFA YMIAKSERSE RAGLIAALVL IGQVILFFIF YVQMSTSLTL FALRNVDPRF
ILFGTTLFTW SAAQFQALNP IWIMMLSPLL VWIYNAFSKS GRDLPVAAKY AFGFGAVAAG
YLVFTISGRY AVDGRVSSWF MVWGYGLYSL GELLVSGLGL AMIARYVPAR MSGFMMGAYF
VATGVSQYLG SVVANFAQMP SHDLPATESL PLYLSLFEKL GWLAAIGMLL ALLLLPMMNR
LSRQHQRCAD ERREEEAVQA QAMASAQ
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