Gene Bamb_4864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4864 
Symbol 
ID4313755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1867262 
End bp1868164 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID638152707 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_776747 
Protein GI115359609 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGA CTACTCCCGT CGTCAGTCTG CCCGTGCAGA CCGACTCGCC GCCGCGTTCG 
CGCTCGCCGC TCGCGCTCGC GTTCGCGCGC TTCCTTCACA ACCGCGCGGC CCTGTTCAGC
CTCGTGCTGC TCGCGCTGAT CACGCTCGCG TGCTTCGCCG GCCCGTGGCT GCTCGCCGCC
GATCCCGCGA CGAGCGACTG GGCGTCGATC AGCCTGCCGC CGACGTTCGC CAACCAGCAC
TGGTTCGGCA CCGACGAACT CGGCCGCGAC CTGCTCGTGC GCACGCTGAT CGGCGGGCGC
GTGTCGATCG AGGTCGGCCT GCTCGGCACG CTGGTGTCCG GGCTGTTCGG CGTCGCGTGG
GGCGCGACCG CCGGCTTCGC GGGCGGCCGC GTCGACTCCG TGATGATGCG CATCGTCGAC
ATGATGTACG CGATCCCGTA CCTGCTGATC GCGATCCTGA TGATGACCCT GTTCGGCCGC
TCGTTCTTGC TGGTCGTGCT GACCATCAGC GCGTTCTCGT GGATCGACAT GGCGCGCGTC
GTGCGCGGCC AGACGCTGTC GCTGCGCAAC CGCGAGTTCG TCGATGCGGC GCGCGCGATC
GGCGTGTCGC CGGCATCGAT CGTGCGGCGC CACATCGTGC CGAACCTGCT CGGCGTGGTC
GTCGTGTACG CGACGGTCTC GGTGCCGAAC ATCGTGCTGA CCGAATCGGT GCTGTCGTTC
CTCGGCCTCG GCGTGCAGGA ACCGATGACG AGCTGGGGCG TGCTGATCCA GGACGGCGCG
CAGAAACTGG AATCGATGCC GTGGCTGCTG CTGGCACCGG CCGTCATGCT GTGCGTGACG
CTTTACTGCG TGAACTTCGT TGGCGACGGC CTGCGTGACG CGCTCGACCC GAAGGATCGC
TGA
 
Protein sequence
MTPTTPVVSL PVQTDSPPRS RSPLALAFAR FLHNRAALFS LVLLALITLA CFAGPWLLAA 
DPATSDWASI SLPPTFANQH WFGTDELGRD LLVRTLIGGR VSIEVGLLGT LVSGLFGVAW
GATAGFAGGR VDSVMMRIVD MMYAIPYLLI AILMMTLFGR SFLLVVLTIS AFSWIDMARV
VRGQTLSLRN REFVDAARAI GVSPASIVRR HIVPNLLGVV VVYATVSVPN IVLTESVLSF
LGLGVQEPMT SWGVLIQDGA QKLESMPWLL LAPAVMLCVT LYCVNFVGDG LRDALDPKDR