| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4862 |
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| Symbol | |
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| ID | 4313753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1865249 |
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| End bp | 1866271 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638152705 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_776745 |
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| Protein GI | 115359607 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0965154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG AAGCACGCCG CAATGCCGGC GCGACGGGCG ACACGCTGCT GTCCGTCGAG
GATCTGAAGG TGCATTTCCG CGTGCCGCTC GGCGGCTATC CGTGGTCGCC GAAGGGCACG
CTGCGCGCGG TCGACGGCGT GTCGTTCGAC GTGAAGCGCG GCGAGACGGT CGGGCTCGTC
GGCGAATCGG GCTGCGGGAA GTCGACGCTC GCGCGCGCGC TGATCGGCCT CGTGCCGATG
ACGGCCGGCA CGGTGCGCTG GCGCGGCGAT GCCGTCGCGC CCGATCACCT GCGCGGTACC
GCGATGCGCC GCGAAGTCCA GATGATCTTC CAGGATCCGC TCGCGTCGCT CGATCCGCGC
ATGACGATCG AGCAGATCGT CGCGGAGCCG CTCGTCACGC ACCACGCGGG CCTCGGCCGC
ACCGAAGTGC GCCGCCGCGT GATCACGATG CTCGAGCGCG TCGGCCTGAA TGCGCATCAC
CTGCTGCGCT ATCCCCACGA ATTTTCCGGC GGGCAGTGCC AGCGCGTCGG GATCGCGCGT
GCGCTGATCA GCGAGCCGCA GCTCGTGATC TGCGACGAAC CCGTCTCGGC GCTCGACGTG
TCGATTCAGG CGCAGATCGT GAACCTGCTG CGCGATCTGC AGCGCGACCT GTCGTTGTCC
TATCTGTTCG TCGCGCACGA TCTGGCGGTG GTGAAGGCCA TCAGCCAGCG CGTGCTCGTG
ATGTATCTCG GCCGCGTGAT GGAGTTCGGC ACGCGGCATG ACGTGTATGG CGTGCCGCAG
CACCCGTACA CGAAGGCGCT GCTCGATGCG GCGCCGACGC CGGAGCCGGC GCGCGAGCGT
GCTCGCCGTC CGATGCTGCT GGCGGGCGAG ATGCCGTCGC CGCTCAACCC GCCGTCCGGC
TGCGCGTTTC GCACGCGCTG CCCGGTCGCG ATCGACGCGT GCGCGCAGGA CGTGCCGCTG
CCGGAAGTGC GGCACGGCTC GGCGGCGCGT GTCGCGTGCA TCCGGGCGGG TGTGGCGGCG
TGA
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| Protein sequence | MSVEARRNAG ATGDTLLSVE DLKVHFRVPL GGYPWSPKGT LRAVDGVSFD VKRGETVGLV
GESGCGKSTL ARALIGLVPM TAGTVRWRGD AVAPDHLRGT AMRREVQMIF QDPLASLDPR
MTIEQIVAEP LVTHHAGLGR TEVRRRVITM LERVGLNAHH LLRYPHEFSG GQCQRVGIAR
ALISEPQLVI CDEPVSALDV SIQAQIVNLL RDLQRDLSLS YLFVAHDLAV VKAISQRVLV
MYLGRVMEFG TRHDVYGVPQ HPYTKALLDA APTPEPARER ARRPMLLAGE MPSPLNPPSG
CAFRTRCPVA IDACAQDVPL PEVRHGSAAR VACIRAGVAA
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