Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4854 |
Symbol | |
ID | 4313745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1854367 |
End bp | 1855770 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638152697 |
Product | citrate transporter |
Protein accession | YP_776737 |
Protein GI | 115359599 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTTTCG TGATCGTCCT CGCCGCGCTG GCGTTCCTGA TGTTCGCCGC GTATCGCGGC TACAGCGTGA TCCTGTTCGC GCCGATCGCC GCGCTCGGCG CGGTCCTTCT GACCGACCCC GCCGCCGTCG CACCGGTCTT CTCCGGCATC TTCATGGAGA AGATGGTCGG CTTCGTCAAA CTCTATTTCC CGGTGTTCAT GCTCGGTGCC GTGTTCGGCA AGGTGATCGA ACTGTCCGGG TTCTCCGAGT CGATCGTCCA TGCGGCGATC CGCTACATCG GCCGCTCGCG TGCGAATGCG GTGATCGTCG CGGTGTGCGC GCTGCTCACC TATGGCGGCG TGTCGCTGTT CGTCGTGGTG TTCGCGGTGT ATCCGTTCGC GGCCGAACTC TATCGCCAGA GCAACATTCC GAAACGATTG ATGCCCGGCG CGATCGCGCT CGGCGCGTTC TCGTTCACGA TGGACTCGCT GCCCGGCACG CCGCAGATCC AGAACATCAT CCCGACCACG TTCTTCAAGA CGACGGCCTG GGCCGCGCCC GTGCTCGGCA CGATCGGCTC GCTGTTCATC GTCGTCGTCG GCCTCACGTA CCTGGAATGG CGCCGCCGTT CGGCGATGGC GAAGGGTGAA GGCTACGGCA CGTCGCTCGT CAACGAACCG GAACGCGTCG AAGCGAAGTC CCTCCCGCAT CCGGCGCTGG CGATCCTGCC GCTGATCCTC GTGGGCGTGT CGAACTTCGC GTTCACGAAG CTGATCCCGC AGTGGTACGG CGCCGCGTCG TACACGGTCG CGCCGGACGT GCTGCCCGGC GTGCACGCGC CGGTCACGAC GTCGATCAAG ACCGTCGTCG CGATCTGGTC GGTCGAGGCC GCGCTGCTGC TCGGCATCGT GCTGGTCATC CTGACCGCGT TCAAGCGCGT GAGCGGCCGC TTCGCTGACG GCTCGAAGGC CGCCGTCGCC GGCGCACTGC TCGCCGCGAT GAACACCGCG TCGGAATACG GTTTCGGCGG CGTGATCGCC GCGCTGCCGG GCTTCCTCGT CGTCAGCGAT GCGCTGAAGA GCATTCCGAA CCCGCTCGTG AACGCGGCCG TATCGGTCAG CTCGCTCGCC GGCATCACCG GTTCGGCGTC GGGCGGCATG AGCATCGCGC TCGCCGCGAT GTCGGACCTG TTCATCAAGG GCGCGCAGGC GGCCAACATT CCGCTGGACG TGCTGCACCG GGTCGTCGCG ATGGCAAGTG GCGGCATGGA CACGCTGCCG CACAATGGCG CGGTCATCAC GCTGCTCGCG GTCACGGGCC TCACGCACCG CCAGTCGTAT CGCGACATCT TCGCGGTCAC CATCATCAAG ACGCTCGCGG TGTTCTTCGT GATCGCCGTG TACTACACGA CGGGCCTCGT GTAA
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Protein sequence | MSFVIVLAAL AFLMFAAYRG YSVILFAPIA ALGAVLLTDP AAVAPVFSGI FMEKMVGFVK LYFPVFMLGA VFGKVIELSG FSESIVHAAI RYIGRSRANA VIVAVCALLT YGGVSLFVVV FAVYPFAAEL YRQSNIPKRL MPGAIALGAF SFTMDSLPGT PQIQNIIPTT FFKTTAWAAP VLGTIGSLFI VVVGLTYLEW RRRSAMAKGE GYGTSLVNEP ERVEAKSLPH PALAILPLIL VGVSNFAFTK LIPQWYGAAS YTVAPDVLPG VHAPVTTSIK TVVAIWSVEA ALLLGIVLVI LTAFKRVSGR FADGSKAAVA GALLAAMNTA SEYGFGGVIA ALPGFLVVSD ALKSIPNPLV NAAVSVSSLA GITGSASGGM SIALAAMSDL FIKGAQAANI PLDVLHRVVA MASGGMDTLP HNGAVITLLA VTGLTHRQSY RDIFAVTIIK TLAVFFVIAV YYTTGLV
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