| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4846 |
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| Symbol | |
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| ID | 4313737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1844602 |
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| End bp | 1845450 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152689 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_776729 |
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| Protein GI | 115359591 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00634927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC TTCGCTATGG CCCGTCCGGC CAGGAAAAGC CCGGCATTCT CGACGCAAAT
GGCCGGATTC GCGACCTGTC CGCGCACGTG CCGGATCTGG CCGGCGACGC GCTGTCCGAC
GCCGGTCTCA CGCGCCTGCG CGCGATCGAC CCGGCCACGC TGCCGCTCGT GTCCGGCGAG
CCGCGCATCG GCGCGTGCGT CGGGCGTGTC GGCAAATTCA TCGGCATTGG TCTGAACTAT
GCCGATCACG CAGCCGAAGC CGGCATGCCG GTGCCGAAGG AGCCGGTGGT ATTCGGCAAG
TGGACGAGTT CGATCTGCGG TCCGAACGAC GGCATCGACA TTCCGAAGGG CTCCGTGAAG
ACGGACTGGG AAGTCGAGCT CGGTGTCGTG ATCGGCACGA CGTGCAAGGA CGTTGACGAA
GCGCGTGCGC TCGATTACGT CGCCGGCTAC TGCGTCGTCA ACGACGTGTC CGAGCGCGAA
TGGCAGATCG AGCGTGGCGG CCAGTGGGAC AAGGGCAAGG GCTTCGACAC GTTCGGCCCG
ATCGGCCCGT GGCTCGTCAC GCGCGACGAG GTGCCCGATC CGCAGCGCCT CGACCTGTGG
CTCGAGGTCG ACGGTCACCG CTATCAGAAC GGCAACACGC GCACGATGGT GTTCACCGTC
GCGCAGCTGG TCGCCTACCT GTCGACGTGC ATGACGCTGC AACCGGGCGA CGTGATCACG
ACCGGTACGC CGCCGGGCGT CGGGATGGGG ATCAAGCCGT CGCCGGTGTT CCTGAAGGCC
GGTCAGACGG TGCGCCTCGG GATCGACGGG CTCGGCGAGC AGCTGCAGAG CACGCGCAAC
GCGCGGTAA
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| Protein sequence | MKLLRYGPSG QEKPGILDAN GRIRDLSAHV PDLAGDALSD AGLTRLRAID PATLPLVSGE
PRIGACVGRV GKFIGIGLNY ADHAAEAGMP VPKEPVVFGK WTSSICGPND GIDIPKGSVK
TDWEVELGVV IGTTCKDVDE ARALDYVAGY CVVNDVSERE WQIERGGQWD KGKGFDTFGP
IGPWLVTRDE VPDPQRLDLW LEVDGHRYQN GNTRTMVFTV AQLVAYLSTC MTLQPGDVIT
TGTPPGVGMG IKPSPVFLKA GQTVRLGIDG LGEQLQSTRN AR
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