Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4839 |
Symbol | |
ID | 4313730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1834991 |
End bp | 1836181 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152682 |
Product | putative AcnD-accessory protein PrpF |
Protein accession | YP_776722 |
Protein GI | 115359584 |
COG category | [S] Function unknown |
COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.805886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCACA TTCCGCAAAT CAGGATTCCG GCGACCTACA TCCGCGGCGG CACCAGCAAG GGCGTGTTCT TCCGGCTGCA GGACCTGCCG GATGCCGCGC AGACGCCGGG CGCCGCGCGT GACGCGCTGC TGCTGCGCGT GATCGGCAGC CCCGATCCGT ACGGCAAGCA GATCGACGGG ATGGGCGGCG CGACTTCGTC CACCAGCAAG ACGGTGATCG TGTCGAAGAG CACGCGGCCC GGTCACGACG TCGACTACCT GTTCGGGCAG GTCGCGATCG ACAAGGCGTT CGTCGACTGG ACCGGCAACT GCGGCAACCT GTCGGCGGCG GTCGGCCCGT TCGCGATCGG CGGCGGTCTT GTCGATGCGT CGCGCGTGCC GCGCGACGGC GTCGCGACCG TGCGGATCTG GCAGGCGAAC ATCGGCAAGA CGATCGTCGC GCACGTGCCG ATCACGAACG GCGCGGTGCA GGAGACGGGC GACTTCGAGT TGGACGGCGT CACGTTCCCG GCCGCCGAAG TGCAGCTCGA GTTCATGAAC CCGGCCGCCG AGGAAGAAGG CGCGGGCGGC TCGATGTTCC CGACCGGCAA CCTCGTCGAC GACCTGGCCG TGCCGGGCAT CGGCACGCTG AAGGCGACCA TGATCAACGC GGGGATTCCG ACCATCTTCG TCGAGGCTGA AGCGATCGGC TACACGGGCA CGGAGCTGCA GGACGCGATC AACGGCGACC CGAAGGCGCT CGAGAAGTTC GAGACGATTC GCGCGCACGG CGCGCTGCGC ATGGGCCTGA TCGACACGCT CGACGAGATC GCGACGCGCC AGCACACGCC GAAGGTCGCG TTCGTCGCGA AACCGGCCGA CTATGTCGCG TCGAGCGGCA AGCGCGTGAA TGCGGGCGAC GTCGACCTGC TGGTGCGGGC GATGTCGATG GGCAAGCTGC ACCACGCGAT GATGGGCACG GCGGCGGTCG CGATCGGCAC GGCCGCGGCG ATTCCCGGCA CGCTGGTGAA TCTCGCGGCG GGCGGCGGTG CGCGCAACGC GGTGCGCTTC GGGCATCCGT CAGGCACGCT GCGCGTCGGC GCGGAAGCGC AGCTCGAGAA CGGCGAGTGG ACCGTCACGA AGGCGATCAT GAGCCGCAGC GCGCGTGTGC TGATGGAGGG GTGGGTGAGG GTGCCGGGCG ACGCGTTCTG A
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Protein sequence | MAHIPQIRIP ATYIRGGTSK GVFFRLQDLP DAAQTPGAAR DALLLRVIGS PDPYGKQIDG MGGATSSTSK TVIVSKSTRP GHDVDYLFGQ VAIDKAFVDW TGNCGNLSAA VGPFAIGGGL VDASRVPRDG VATVRIWQAN IGKTIVAHVP ITNGAVQETG DFELDGVTFP AAEVQLEFMN PAAEEEGAGG SMFPTGNLVD DLAVPGIGTL KATMINAGIP TIFVEAEAIG YTGTELQDAI NGDPKALEKF ETIRAHGALR MGLIDTLDEI ATRQHTPKVA FVAKPADYVA SSGKRVNAGD VDLLVRAMSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGGARNAVRF GHPSGTLRVG AEAQLENGEW TVTKAIMSRS ARVLMEGWVR VPGDAF
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