| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4838 |
|---|
| Symbol | |
|---|
| ID | 4313729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1833580 |
|---|
| End bp | 1834632 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638152681 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_776721 |
|---|
| Protein GI | 115359583 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.270191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTTG ATGCGCCGCT TTCCGGCGTC CATATCGTCG AATTCGAAGG TCTCGGCCCC
GGCCCGCTCG CGGGCTGGAT GCTCGCCGGA ATGGGCGCGC GCATCACGCT GATCGCGCGT
CCGGCCGGCC GCACGAGTGC GCCGGACGCG TTGCAGGGCC GCGACGGCGA CCTGCTGCGC
GAAGGCAAGA CGGTCGTCGA GCTCGATCTG AAGACACCGG ACGGCCGCGA TGCGGCGCTC
GCGCTGATCG CGCAGGCCGA TGCGCTGATC GAGGGGCTGC GACCGGGCGT GATGGAGCGT
CTCGGCCTCG GGCCCGACGC TTGTGCACGC CGCAATCCGA AGCTCGTGTA CGGACGGATG
ACGGGCTGGG GCCAGGACGG GCCGCTCGCG ACGGCCGCCG GGCACGACCT GAACTACGTC
GCGCTGACGG GGCTGCTGTC GCTGTCCGCG CCGCGTGACG GCCGCCCCGG CGTGCCGCCG
ACCGTCGTCG GCGATGCGGG TGGCGCGCTC GGGCTCGCGT TCGGGATCGT CTGCGCGCTG
TTCGACGTGC GCGGCGGCGG CCCGGGGCGG GTGGTCGACG GCGCGATCGT CGATATCGTG
TCGATGCTCG GCTCGCTCGC GCTGTGGGCG CGCGCGAACG GCCAGCTCGA TGGCGCGCAG
CCAAGCCTCT TCCACGACGC GCCGTTCTAC GACGTATATC GCTGCGCGGA CGGCGAATGC
GTGACGATCG GCGCGCTCGA GCCACCGTTC TACGCGCTGC TGGTCGAGCG GCTCGGGCTG
ACCGACGTCG ATCCCGCGTC GCAGTACGAC CGCGCGCGCT GGCCGGCGCT GAAGGCGCGT
TTCGCCGAGG TATTTGCGCA GCAGCCCTCC GCGCACTGGC GCGCGCTGCT CGAAGGCAGC
GACGCATGCT TTGCGCCGGT GCTGAGCGTG GCCGAAGCGG TGGAGCACCC GCACAATGCG
GCGCGCGGGA TTTATCGCGT CGACGGGGAC GGCAACGTCC GGGCGCGCGT GGCGCCGCGA
TTTTTGCCGC TGAGGGGCGA CGACGCGGAA TAG
|
|---|
| Protein sequence | MSLDAPLSGV HIVEFEGLGP GPLAGWMLAG MGARITLIAR PAGRTSAPDA LQGRDGDLLR
EGKTVVELDL KTPDGRDAAL ALIAQADALI EGLRPGVMER LGLGPDACAR RNPKLVYGRM
TGWGQDGPLA TAAGHDLNYV ALTGLLSLSA PRDGRPGVPP TVVGDAGGAL GLAFGIVCAL
FDVRGGGPGR VVDGAIVDIV SMLGSLALWA RANGQLDGAQ PSLFHDAPFY DVYRCADGEC
VTIGALEPPF YALLVERLGL TDVDPASQYD RARWPALKAR FAEVFAQQPS AHWRALLEGS
DACFAPVLSV AEAVEHPHNA ARGIYRVDGD GNVRARVAPR FLPLRGDDAE
|
|---|
| |