Gene Bamb_4833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4833 
Symbol 
ID4313724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1829309 
End bp1830493 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content71% 
IMG OID638152676 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_776716 
Protein GI115359578 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTATC CTTGGGCCCG GCCGCGCCGC TCCGGGCCGC GCCGACTCGA TTCGATCCAA 
GCGCTCAATC CCGCCATGTC CGTTCCCGAT TCCGATTCCG CTCAGACCGC CCGATTGCGC
GACCATTTTG CGCACGTCAT CTTGCCGATC TGGCAGGGTT CAGGGTTCGA CCACACGTTG
CGGCTGCCGT TCGAGGCCGT CGATCCGGCC ACCCATGCCC CGCTGCCCGC CACCCGTTAT
CGCGCAATGG CATGCGCGCG GCAACTGTTC GTGTTCGCGC AGGCCGGCAA CACCGCGCAC
GCGGCCACGC TGTTCGACTC GCTGTGCAGC CGCTTCCGCG ACCCGCGCCA CGGCGGCTGG
TTCTACAGCG TCGACGCGCA AGGCGCGCCG CTCGACACGA CCAAGGACCT CTATACGCAC
GCATTCGTCG TGTTCGCGTG CGCCGCATGG CATGCGGCGT CGGGCGACGC CGCGGCGCGC
ACGGTCGCCG AGGACACCGC CGCATTGATC CAGGACCGCT TCGCGCCGCA GCCGGGCGAC
GCGCTGCTCG ACGCCGCGCG CCACGCCGAT TTCTCGTCGT CGGGCGGCGG CGCGCTGCAA
AACCCGTTGA TGCACCTGAC CGAAGCATGG CTCGCGGCCG CCGATGCGTT CGGCGATGCG
GCGTTCAACG ATGCGCTCGC ACGCACCGCG CAGGCCGTCG AGCGCACGTT CGTCGATCCG
GCGACCGGCT GCGTCGCCGA GCTGCCGCTC GGGGCGCCCG ACAACCGCTT CGAGCCCGGC
CACCAATTCG AATGGTTCTA TCTGGTCGAC GCGGCCGGCG CTCGGCTCGC GCAGACCGGG
CTTCCCGACG CACTCGCGCG CGCGTTCGCG TTCGCCGAGC AGCACGGCAT CGATCCGCAG
ACGGGCGCCG TATGCGCGGC CGTCGACGCG CAAGGCGCGT GCATCGACGG CACGCAGCGA
ATCTGGGCGC AGACCGAATA CCTGCGCGCG CTCGCGACGC ACGGCGGCAC GCCCGCTTCC
GCGCCGCTCG CGCGGCAGAT CGAGCGCTTC GCCGCGCGCT TCCTGCATCC GCGCGGCTGG
TTCGAGTGCA AGACGGCCGA CGGGCAGGTG TCGCGCGCCG ACATGCCGTC GACGACGCCC
TACCACCTCG CGACCGCTTA CGCGGCGCTG CCCGCCGCGT CGTAA
 
Protein sequence
MVYPWARPRR SGPRRLDSIQ ALNPAMSVPD SDSAQTARLR DHFAHVILPI WQGSGFDHTL 
RLPFEAVDPA THAPLPATRY RAMACARQLF VFAQAGNTAH AATLFDSLCS RFRDPRHGGW
FYSVDAQGAP LDTTKDLYTH AFVVFACAAW HAASGDAAAR TVAEDTAALI QDRFAPQPGD
ALLDAARHAD FSSSGGGALQ NPLMHLTEAW LAAADAFGDA AFNDALARTA QAVERTFVDP
ATGCVAELPL GAPDNRFEPG HQFEWFYLVD AAGARLAQTG LPDALARAFA FAEQHGIDPQ
TGAVCAAVDA QGACIDGTQR IWAQTEYLRA LATHGGTPAS APLARQIERF AARFLHPRGW
FECKTADGQV SRADMPSTTP YHLATAYAAL PAAS