| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4827 |
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| Symbol | |
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| ID | 4313718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1822078 |
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| End bp | 1824918 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638152670 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_776710 |
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| Protein GI | 115359572 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC CACTCGCGTC CGCGGGCTTG CAAACGATCG AACTGGCCGT CGACGGCATG
CATTGCGGCG GCTGCACGGG CCGCGTGCAG CGTGCCCTCG CCGCCGTGCC GGGCGTCGTC
GAGGCCGCGG TCGATCTCGA CGCGCAGGCG GCGACGGTCA CCGCGCAGGA TACGGTCGAG
CCCGCGCAGC TCGTCGATGC GGTCAGTGCG GCGGGATATC GCGCGACCGT GCGCGAAGCG
GCATTCGAAA CCGTCGCTGC CGCGCAGGCG GAGCACGCGC CACGCGCCGA AGCGCTGCCC
GCCACGCCGG CGGCGCTGCC CGCGGCTGGG GCTGGGGCTG GGGCTGGGGC CGGGGCCGGG
GCCGGGGCCA CGATCGAACT CGAGATCGAC GGCATGACCT GCGCGTCGTG CGTGTCGCGC
GTCGAAAAGG CGCTGGCGAA GGTGCCTGGC GTCACGCGTG CGTCGGTCAA CCTCGCGACC
GAACGCGCGA CCATCGACGC AGCCCCGGAC GTTTCCGCGT CGCGACTGGC CGAAGCCGTA
CAGCAGGCCG GCTACGGCGC GACAGCGGTC GCAGCGCCGC CGCCGGCCGC CTCCCGCGAT
CTCGAATTCG ACATCGGCGG CATGACGTGC GCATCCTGCG CCGGCCGCGT CGAAAAGGCG
CTGGCCGCGG TGCCGGGCGT CGCGCGCGCG TCGGTCAATC TCGCGACCGA GCGCGCATCG
GTGCATGGCG CCGGCGCGCT CGACGCCGCC GCGCTGATCG CGGCGGTCAC GACGGCCGGC
TACCGCGCAT CGCTCGCCGC CGCGCCGGAC GCCGGCGCTG TAGTCGAAGT TCCCTCCAGC
GACGCGGCAC AGGCCCCCGA GGCCCGCAAG CGCCGCGAAG CGATCCGCGA ACGCAATCTG
GTGATCGGCT CGGCCGTGCT GAGCGCACCG CTCGTCGTAC CGATGCTCGT CGCGCCGTTC
GGCATCGACG CGATGCTGCC CGGCTGGCTG CAGCTCGTGC TCGCGTCGAT CGTCCAGTTC
GGCTTCGGCG CGCGCTTCTA CCGCGCCGCC TGGCACGCGG TGAAGGCGCG CACGGGCAAC
ATGGACCTGC TCGTCGCGCT CGGTACATCG GCCGCGTTCG GCCTGAGCCT GTGGATGCTG
GTGCGCGACC CCGTCGACCC AGGCCACCTG TATTTCGAGG CATCGGCCGT CATCGTCACG
CTGGTGCGCT TCGGCAAATG GCTCGAAGCC CGCGCGAAAC GCCAGACGAC CGAGGCGATC
CGCGCGCTGA ACGCGCTGCG TCCCGACCGC GCGCGCGTCG TCGAGCACGG CGTTGAACGC
GACGTGCCGC TCGGGCAGGT GCGCGTCGGC ACGACCGTCA GCATCCGTCC CGGCGAGCGC
GTGCCCGTCG ACGGGCGAAT CGTGTCGGGC CGCTCGCACG TCGACGAATC GCTGATCACC
GGCGAAAGCC TGCCGGTGCC GAAGGACGAC GGCGATCCGG TCACCGCCGG CTCGATCAAC
GGCGAAGGCG CGCTCGTCGT CGAAACCACC GCGATCGGCG CGGAGACGAC GCTCGCGCGC
ATCATCCGCC TCGTCGAATC CGCGCAGGCG GAAAAGGCGC CGATCCAGCG GCTGGTCGAT
CGCGTGAGCG AAGTGTTCGT GCCGGCGATC CTCGGCATCG CCGTGCTGAC GCTGATCGGC
TGGCTGATCG CCGGCGCCGG CACCGAAACG GCGATCCTCA ACGCGGTCGC GGTGCTCGTC
ATCGCGTGCC CGTGTGCGCT CGGCCTCGCG ACGCCCGCGG CGATCATGGC CGGCACCGGC
GTCGCGGCGC GCCACGGCGT GCTGATCAAG GACGCGCAGG CGCTCGAACT CGCGCAGCGC
ACGACCGTGA TCGCGTTCGA CAAGACCGGC ACGCTGACCG AAGGCAAGCC GTCCGTGACC
GCGTTCGACG CGGTCGGCAT CCCACGTGAG CAAGCGCTCG CTCTCGCGGC CGCGGTCCAG
CGGCAAAGCG ATCATCCGCT CGCGCGCGCC GTGGTCGCCG CGCACGAAGC GGATGTCGTG
GCCCGCGGTG GCGGCGCAGG TTCGGCCGAT ATCGTCGCGG CCGATGCGCG CGCGGTGGCC
GGCCGCGGTG TCCAAGCGCA CGTCGACGGG CAGCTTCTCG CGCTCGGCAG CACCCGCTGG
CGCGATGAAC TCGGCATCGA CGTGCCGCCG GAACTCGACG CGCGTGCCGC CGAGCTCGAA
CACGCGGGCA ACACGATTTC GTGGCTGATG CGCGCCGATG CGCCGCGCGC GTTGCTCGCG
CTGATCGCGT TCGGCGACAC CGTGAAGCCC GGCGCGCGCG ACGCGATCGC CGCACTGTCG
GCGCGCGGCG TCGCGAGCGT ACTCGTGACG GGCGACAACC GCGGCAGCGC GGCGGCCGTC
GCGGCATCGC TCGGGATCGG CGAAGTGCAT GCGCAGGTGC TGCCCGACGA CAAGGCACGC
GTGGTGGCCG AACTGAAGCG CACGCACGGC GGCGTCGTCG CGATGGTCGG CGACGGGATC
AACGACGCGC CCGCGCTCGC CGCGGCCGAC GTCGGCATCG CGATGGCGAC CGGCACCGAC
GTCGCGATGC ATACGGCCGG CATCACGCTG ATGCGCGGCG ATCCGGCGCT CGTCGCCGAT
GCGATCGACA TCTCGAAGCG GACGTACCGG AAGATCCAGC AGAACCTGTT CTGGGCGTTC
GTCTACAACC TGATCGGCGT GCCGCTCGCG GCGCTCGGCT GGCTGAACCC GGTGATCGCG
GGGGCGGCGA TGGCGTTCTC CAGCGTCAGC GTCGTGACGA ACGCGTTGTT GCTGCGGAGG
TGGAAAGGAC GGGCGAGGTG A
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| Protein sequence | MTEPLASAGL QTIELAVDGM HCGGCTGRVQ RALAAVPGVV EAAVDLDAQA ATVTAQDTVE
PAQLVDAVSA AGYRATVREA AFETVAAAQA EHAPRAEALP ATPAALPAAG AGAGAGAGAG
AGATIELEID GMTCASCVSR VEKALAKVPG VTRASVNLAT ERATIDAAPD VSASRLAEAV
QQAGYGATAV AAPPPAASRD LEFDIGGMTC ASCAGRVEKA LAAVPGVARA SVNLATERAS
VHGAGALDAA ALIAAVTTAG YRASLAAAPD AGAVVEVPSS DAAQAPEARK RREAIRERNL
VIGSAVLSAP LVVPMLVAPF GIDAMLPGWL QLVLASIVQF GFGARFYRAA WHAVKARTGN
MDLLVALGTS AAFGLSLWML VRDPVDPGHL YFEASAVIVT LVRFGKWLEA RAKRQTTEAI
RALNALRPDR ARVVEHGVER DVPLGQVRVG TTVSIRPGER VPVDGRIVSG RSHVDESLIT
GESLPVPKDD GDPVTAGSIN GEGALVVETT AIGAETTLAR IIRLVESAQA EKAPIQRLVD
RVSEVFVPAI LGIAVLTLIG WLIAGAGTET AILNAVAVLV IACPCALGLA TPAAIMAGTG
VAARHGVLIK DAQALELAQR TTVIAFDKTG TLTEGKPSVT AFDAVGIPRE QALALAAAVQ
RQSDHPLARA VVAAHEADVV ARGGGAGSAD IVAADARAVA GRGVQAHVDG QLLALGSTRW
RDELGIDVPP ELDARAAELE HAGNTISWLM RADAPRALLA LIAFGDTVKP GARDAIAALS
ARGVASVLVT GDNRGSAAAV AASLGIGEVH AQVLPDDKAR VVAELKRTHG GVVAMVGDGI
NDAPALAAAD VGIAMATGTD VAMHTAGITL MRGDPALVAD AIDISKRTYR KIQQNLFWAF
VYNLIGVPLA ALGWLNPVIA GAAMAFSSVS VVTNALLLRR WKGRAR
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