Gene Bamb_4826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4826 
Symbol 
ID4313717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1820246 
End bp1821685 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content72% 
IMG OID638152669 
Producthypothetical protein 
Protein accessionYP_776709 
Protein GI115359571 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.853525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA ACCTACGAGA ATCAATTTCG CTGCGGCGCG CGGCAGGCGC GTCGCTGGTC 
CTGGCGGCGC TGCTGGCGGG CTGCGCGTCG CAACCGGACG CGATCCAGCG GAAAACCGGC
TGGATGCGCG CCGAAGTAGC CGATTCCTAT ATATATGCGT ATCCGCTCGT GCTGATGGAC
GTCGCGAAGG AAGCCGCGAC AGGCGGCGAC GGTGCGCAGC CGGGCCAGGC GCCGCTCAAC
ACGCTGCGTC ACGCGCAGGC GCTGCCGCCC GTCGGCGCGC TCAACCCGCC GCTGCCGGGC
GTCGACACGC TCGACTCGAC CGGCTGGCTC GACGTCGGCG CCGAGCCGGT GATCGTCACG
CTGCCCGACA CCCGCGGCCG CTACTGGGAT GCCCGCGCGC TCGACATGTG GACGAACGTG
CTGTGGTCGT CGTCGAGTGT CGCGGCGCGG GGCGCGCGTG GCGCCGCGCG ATCGCAAACG
ATTGCCTTTG CCGCGAAGGA CTGGCAGGGC ACGCTGCCGA AGGGCGCATT GCGTGTCGAC
GTGCCGTCGG CCAACGCATG GCTCGAAGTG CGGCTGCAGA CGAGCGGCGG GCGCGACCTC
ACGAACGTGA AGAAACTGCA GCGGGCGATC CGCGTGGTGC CGCTGTCCGT CTATACGGGC
AGCGCGCGCG GCGCGTCGGT CGCGGTCCAT GCGGGCAGCG CGCCGTCGGA AGCGGCGAGC
GGCGGCACGC CGGCCGAGCA GGTCGCCGCG CTCGACCCGA AGGCGTTCTT CACGCGTTTC
GCGCAGGTGC TGCAGGACAA CCCGGCACCC GCCGACGACG CGCACGCGCA GGAACTGCTG
AACGACATCG GCGTGTCGGC CGGCTACTCG GTGCTGTGGA CCGGCGATCG CCTGAGCGCC
GCGACGGCCG GCGTCGCCGA AGCGCGCGCG CGGCTCGCGG CACCGCCGCC GAACCTGCTG
AACGCGAACG GCTGGAGCTG GATCGGCGAC GCGGCCGGCA AGTACGGCCA GGACTACGCG
CTGCGCGCGT ACGCGGCCTA CACGCAGTTC GGCACCGCGA CGCGTGACGA CGAGACGCTC
GCGCTCGTGC GCGTCGACAG CGACGGCCAT CCGCTGAACG GCGCGAACCG CTACGTGCTG
CACTTCGCGC CGGGCGCGCT GCCGCCGGTG CGCGGGTTCT GGACGCTGAC ACCGTACTCC
ACCAACGGCG CGCTGCCCGA CGTCGGCTCG GCGCGCCGCT CGCTCGGCGA CCGCGACCGG
CTGCGCCGCA ATCACGACGG CTCGATCGAC GTGGTCGTGT CGGCGTCGTC GGGCGGCGCG
CATGCGGCGA ACTGGCTGCC GGCGCCGCGC ACCGATTTCG CGCTCGCGTT GCGCCTCTAC
GCGCCGAAGC CGCAAGCGAC CGACGGCTCG TGGATGCCGC CCGCCGTGGT CCGGAAATGA
 
Protein sequence
MIENLRESIS LRRAAGASLV LAALLAGCAS QPDAIQRKTG WMRAEVADSY IYAYPLVLMD 
VAKEAATGGD GAQPGQAPLN TLRHAQALPP VGALNPPLPG VDTLDSTGWL DVGAEPVIVT
LPDTRGRYWD ARALDMWTNV LWSSSSVAAR GARGAARSQT IAFAAKDWQG TLPKGALRVD
VPSANAWLEV RLQTSGGRDL TNVKKLQRAI RVVPLSVYTG SARGASVAVH AGSAPSEAAS
GGTPAEQVAA LDPKAFFTRF AQVLQDNPAP ADDAHAQELL NDIGVSAGYS VLWTGDRLSA
ATAGVAEARA RLAAPPPNLL NANGWSWIGD AAGKYGQDYA LRAYAAYTQF GTATRDDETL
ALVRVDSDGH PLNGANRYVL HFAPGALPPV RGFWTLTPYS TNGALPDVGS ARRSLGDRDR
LRRNHDGSID VVVSASSGGA HAANWLPAPR TDFALALRLY APKPQATDGS WMPPAVVRK