| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4819 |
|---|
| Symbol | |
|---|
| ID | 4313710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1812012 |
|---|
| End bp | 1813019 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638152662 |
|---|
| Product | cytochrome d ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_776702 |
|---|
| Protein GI | 115359564 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCA CCGTAATCTG GGCCGCGATC ATCGCGTTGG GGCTCTTCAT GTACGTCGTG
CTCGACGGCT TCGACCTCGG CATCGGCATC GTCTTCCCGT TCTTCCCGGA CGAGAAGGAA
CGCGACCTGA TGATGAACAC CGTCGCGCCC GTGTGGGACG GCAACGAGAC GTGGCTCGTG
CTCGGCGGCG CCGGGCTGTT CGCGGTGTTT CCGATCGTCT ATTCGACGGT GCTGTCGGCG
CTGTACCTGC CGCTGATCTT CATGCTGGTG TGCCTGATCT TCCGCGGCGT GTCGTTCGAG
ATCCGCGCGA AGGCGCGGCG CACGAAGCAG CTGTGGGATC TCGCGTTCAT CGGCGGCTCG
GCCGGCGCGA CGCTGTTCCA GGGGATCGCG CTCGGCGCGT TCCTGCAGGG CATCAACGTG
AAGGACGGCG TGTTCGCGGG CGACGCATTC GACTGGCTCA CGCCGTTCAG CCTGCTGACG
GGCCTCGGCC TGATCGTGAC ATACGCGCTG CTCGGCTGCT GCTGGCTCGT CGCGAAAACG
GAGGGCGATC TGCAACGGCG CCTGCATCGC GTCGTGTGGC CGCTGACCGT CGTGCTGCTC
GGCTTCATCG CCGTTATCAG CCTGTGGACG CCGCTGCAGG ATCCGGCCAT CGCGCAGCGC
TGGTTCGATT CGGGGCTGTT CTGGCGACTG CTGCCGGTGC CGTTCCTGGT CGCCGCGTGC
GCGGTGTGGA TGCGTCGCGC GGTGCGCGCG CGCCACGACA TGACGCCGTT CATGCTCGCG
CTGGCGCTCG TGCTGCTCGG CTATGTCGGC CTGCTCGTCA CGATGTTCCC GTATGCGATT
CCGCAGACGA TGACGATCTG GGAAGCGGCG GCGCCGCGTT CGAGCCAGAC CTTCACGTTG
GTCGGCGCAG CGGTTATCCT CCCCATCATC ATCGCCTACA CGACGATGGG TTATTGGGTA
TTCCGAGGCA AGGTGCGCCA TGAAGACCAG CATTACTACC ACCACTGA
|
|---|
| Protein sequence | MDVTVIWAAI IALGLFMYVV LDGFDLGIGI VFPFFPDEKE RDLMMNTVAP VWDGNETWLV
LGGAGLFAVF PIVYSTVLSA LYLPLIFMLV CLIFRGVSFE IRAKARRTKQ LWDLAFIGGS
AGATLFQGIA LGAFLQGINV KDGVFAGDAF DWLTPFSLLT GLGLIVTYAL LGCCWLVAKT
EGDLQRRLHR VVWPLTVVLL GFIAVISLWT PLQDPAIAQR WFDSGLFWRL LPVPFLVAAC
AVWMRRAVRA RHDMTPFMLA LALVLLGYVG LLVTMFPYAI PQTMTIWEAA APRSSQTFTL
VGAAVILPII IAYTTMGYWV FRGKVRHEDQ HYYHH
|
|---|
| |