Gene Bamb_4809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4809 
Symbol 
ID4313700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1801462 
End bp1802100 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID638152652 
ProductDSBA oxidoreductase 
Protein accessionYP_776692 
Protein GI115359554 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.287692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG CGCGCACCGC CACCTGGTAT TTCGATTTCG TTTCTCCGTT CGCGTACCTG 
CAGCAGGAAC GGTTCGACCA ACTGCCGCCT GCCGCCGCAT ACGAGCCGAA GCCGATCGTG
CTCGGCGCGC TGCTCGCGCA CTGGGGCCAG AAAGCGCCGG CCGAGATCGC GGCGAAGCGC
GTCTTCACCT ATCGCCACGC GCAATACCGC GCGGACAAGC TCGGCATCCC GTTCCGGATG
CCGCCCGCGC ATCCGTTCAA CCCGATCCGG CCGCTGCGGC TCGCGATCGC GATGGGCAAC
TCGCCCGATG CGATTCGGCG GATCTTCCGG CACATCTGGC GCGACGGCCA GGACGTGTCG
ACGCCGGAGG GCTTCGCCGC GCTGTGCGAG GCGGTCGGCT TTCCCGAAGG CGTGACGGCC
GTCGACGCGC AACCGGTGAA GAACGCGCTA CGCGCGAACA CCGATCAAGC GATCGCGCAC
GGCGTGTTCG GCGTGCCGAC CTTCGAACTC GACGGCGACC TGTTCTGGGG CGAGGATGCG
ACCGACATGT TCGTCGACTG CGCGACGTCG CGCGCATGGC TCGACTCGCC CGAAGTACGC
CGCATCAGCG CGCTGCCCGA AGGCATCCGG CGCGGCTGA
 
Protein sequence
MNAARTATWY FDFVSPFAYL QQERFDQLPP AAAYEPKPIV LGALLAHWGQ KAPAEIAAKR 
VFTYRHAQYR ADKLGIPFRM PPAHPFNPIR PLRLAIAMGN SPDAIRRIFR HIWRDGQDVS
TPEGFAALCE AVGFPEGVTA VDAQPVKNAL RANTDQAIAH GVFGVPTFEL DGDLFWGEDA
TDMFVDCATS RAWLDSPEVR RISALPEGIR RG