Gene Bamb_4807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4807 
Symbol 
ID4313698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1799327 
End bp1800313 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content71% 
IMG OID638152650 
Productpyruvate carboxyltransferase 
Protein accessionYP_776690 
Protein GI115359552 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.490864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTT CCGAAGATCC GCAGGTGCTG GTGAGCGAGG TCGGGCCGCG TGACGGTCTG 
CAGAGCATCA AGGCCGTGAT GCCGACGGCC GACAAGTTGC GCTGGATCAC CGCGCTCGCC
GCGGCCGGCC TGCGCGAAAT CGAGGTCGGA TCGTTCGTGC CCGCGCGGCT GTTGCCGCAG
ATGGCCGACA TCCGGGAAGT CGTCGCGCAT GCGCTGGCGA TTCCGGGGCT GCGCGTCGCC
GCGCTTGCAC CGAACCTGCG CGGCGCCGAA AGCGCGTTCG AGGCGGGCGT CCACAAGCTG
ACGTTGCCGG TATCGGTGAC CGAAGCGCAC TCGCTGGCGA ACATCCGCAA GACGCCGGCG
CAGATGATCG ACGAGGTACG CGCGATCGTC GCGCTGCGCG ATGCGCGGTT TCCGTCGGTG
CAGATCGAGG CGGGCGTCTC GGTGGCGTTC GGTTGCACGC TCGCCGGCGC GGTCTCCGAC
GACGAGACGA TCGCGATGGC GGCTGCGATG GCCGAATGCG GCGTCGACGA GATCGGGCTC
TCCGATACGA GCGGCTACGC GAACCCGGCG CAGGTGCGCC GGCTGTTCAT GCGCCTGCGG
CGCGAAGTCG GCGACAAGGC CGGCGGCGCG CACTTCCACA ATACGCGCGG GCAGGGGCTC
GCCAACGTCG TCGCGGCGCT CGACGCCGGC GTGACGACGC TCGACGCGAG CCAGGGCGGC
CTGGGTGGCT GCCCCTATGC GCCGGGTGCG ACCGGCAACA TCGTCACCGA GGATCTCGTG
TTCCTGCTGG AGGCGATGGG GTACGACACG GGCGTCGACG TGGACGCGCT GCTCGCCGCG
CGCGCGATCC TGCACGCGGC ATTGCCTGCC GAGGCGCTGT ACGGCCACGT GCCGGACGCA
GGGCTGCCGA AGGGGTTCTG GTATGCGGAC GGCCGCGCGC CGAGCGCGAC CCAGCCCGAA
GGATGCCTGA CGGGAGTCGC GCAATGA
 
Protein sequence
MSVSEDPQVL VSEVGPRDGL QSIKAVMPTA DKLRWITALA AAGLREIEVG SFVPARLLPQ 
MADIREVVAH ALAIPGLRVA ALAPNLRGAE SAFEAGVHKL TLPVSVTEAH SLANIRKTPA
QMIDEVRAIV ALRDARFPSV QIEAGVSVAF GCTLAGAVSD DETIAMAAAM AECGVDEIGL
SDTSGYANPA QVRRLFMRLR REVGDKAGGA HFHNTRGQGL ANVVAALDAG VTTLDASQGG
LGGCPYAPGA TGNIVTEDLV FLLEAMGYDT GVDVDALLAA RAILHAALPA EALYGHVPDA
GLPKGFWYAD GRAPSATQPE GCLTGVAQ