Gene Bamb_4799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4799 
Symbol 
ID4313690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1792300 
End bp1792887 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content71% 
IMG OID638152642 
ProductTetR family transcriptional regulator 
Protein accessionYP_776682 
Protein GI115359544 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.914161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCT CGAGGCAACA GGCTGCCGAC AACCGCAACG CGATCGTCGC GGCCGCCGAG 
CGGCTGTTCC GGGTGCGCGG TGTCGACGCG GTCGGTTTGA CGGAACTGAT GAAGGAAGCC
GGTTTCACGC AGGGCGGCTT CTACAACCAC TTCAAATCGA AGGATGCGCT GGTCGCCGCG
GTGATGGAAA AGGCGATGCA GGACGGCGCG GATTCGCCGC GCGCCGGCAG CGTCGCGCAA
CAGGTGACGT CGTACCTGTC GACCGCGCAT CGCGACAACG TCGAAGCCGG GTGCCCGCTG
TCCGCCTTCG CGGGCGATGC GCCACGCCTG ACCGACGCGG CACGCGCCTG CTACGCACAC
GGCGTCGCCG GCTATCTCGA ACGGCTGGAA CGGTTGGTGG CTATGGAGGG CGCGGCTGCG
GCGGACACGC GCCGCGACGC GATCGCCGTG TTCAGCCAGA TGGTCGGCGC GCTCGTGCTG
TCGCGCGCGG TCGCCGGCAC CGATCCGGCG CTGGCCGATG AAATCCTCGA CGCGGGGCGG
CGCGCGCTCG CCGGCCAGCC CGACGATCCG GCCGTGCCGG CCGCGTAG
 
Protein sequence
MGVSRQQAAD NRNAIVAAAE RLFRVRGVDA VGLTELMKEA GFTQGGFYNH FKSKDALVAA 
VMEKAMQDGA DSPRAGSVAQ QVTSYLSTAH RDNVEAGCPL SAFAGDAPRL TDAARACYAH
GVAGYLERLE RLVAMEGAAA ADTRRDAIAV FSQMVGALVL SRAVAGTDPA LADEILDAGR
RALAGQPDDP AVPAA