Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4798 |
Symbol | |
ID | 4313689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1791299 |
End bp | 1792003 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638152641 |
Product | short chain dehydrogenase |
Protein accession | YP_776681 |
Protein GI | 115359543 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.58679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG AAGGTGCAGT CGTTTTCGTC ACGGGCGCGA ACCGCGGGCT TGGGCTCGAA TTCGCGAAGC AGGCGCTCGA ACGCGGGGCG CGGAAGGTCT ATGCGGGCGC GCGCGATCCG GCCGGCGTGA CGCTGCCGGG CGTGGTGCCC GTGAAGCTCG ACGTCACCGA TCCGGCGGCG GTCGCCGCGG CGGCCGAAGC CGCGCGCGAC GTCACGCTGC TGATCAACAA CGCGGGCATC GCGCGGCTCG GCAGCCTGAC CGACGACGGC GCGGTCGACG CGCTGCGCGA TCATCTCGAA ACCAACGTGT TCGGGATGCT GGCGATGTCG CGCGCATTCG CGGCCACGCT CGCCGGCCAC GGGGGCGGCG CGATCCTGAA CGTGCTGTCC GTCGCGAGCT GGGTGAACCG GCCGATCCTG TCGGGCTACG GCGTGTCGAA GTCGGCCGCG TGGGCGCTGA CCAACGGGCT GCGGCATTCG CTGCGCGAGC AGCGCACGCA GGTGGTCGGG CTGCACGCCG GCTTCATCGA TACGGACCTG ACACGCGGCC TCGACGTGCC GAAGGCGACG CCGGCCGACG TCGTGCGCCA GGCATACGAC GCGATCGAAT CCGGAGCGGA GGAGGTGGCC ACCGACGACT TCACGCGGCA GGTGAAGGCC ACGTTGTCGG CCGGTGTTTA TCTGGACGAG GCGACGCCGG TCTGA
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Protein sequence | MKIEGAVVFV TGANRGLGLE FAKQALERGA RKVYAGARDP AGVTLPGVVP VKLDVTDPAA VAAAAEAARD VTLLINNAGI ARLGSLTDDG AVDALRDHLE TNVFGMLAMS RAFAATLAGH GGGAILNVLS VASWVNRPIL SGYGVSKSAA WALTNGLRHS LREQRTQVVG LHAGFIDTDL TRGLDVPKAT PADVVRQAYD AIESGAEEVA TDDFTRQVKA TLSAGVYLDE ATPV
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