Gene Bamb_4791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4791 
Symbol 
ID4313682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1784515 
End bp1784934 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID638152634 
Producthistidine triad (HIT) protein 
Protein accessionYP_776674 
Protein GI115359536 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG ACAACAACAA CCCGTTCGCC AGAATCCTGC GCGGCGAACT GCCGTGCGTG 
AAGGTCGCCG AAGACGACGC AACCCTCGCG ATCATGGATC TCATGCCGCA GGCCGACGGT
CACGTGCTCG TGATCCCGAA GGAGCCGGCC GCGCAGATCT TCGAGCTGTC CGGCGATGCG
GCCGCGGCCG GCATCCGGAT GACGCAGCGC GTCGCGGCGG CCGTGCGCGC GGCGCTCGGG
CCGGACGGCG TGTTCATCGG CCAGTTCAAC GGCGCGGCGG CGGGCCAGAC GGTCCCGCAC
GTGCATTTCC ACGTGATCCC GCGCTGGGAA GGTGTCGAGC TGCGGCTGCA TGCGCGCGAC
ATTGCCGACG CGGCCGCGCT CGAATCGGTC GCGCAGCGCA TCCGCGAACG TTTCGTGTAA
 
Protein sequence
MSYDNNNPFA RILRGELPCV KVAEDDATLA IMDLMPQADG HVLVIPKEPA AQIFELSGDA 
AAAGIRMTQR VAAAVRAALG PDGVFIGQFN GAAAGQTVPH VHFHVIPRWE GVELRLHARD
IADAAALESV AQRIRERFV