| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4772 |
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| Symbol | |
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| ID | 4313664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1762968 |
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| End bp | 1765277 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152616 |
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| Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
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| Protein accession | YP_776656 |
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| Protein GI | 115359518 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.784759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATTGCT ATTCGCTGGC GCGGCGGCCG ATCTGTGCCG CGCTGTTCGG CGTGTTCGGC
CTGTCCGCCG CCCCCGCTTA CGCCGATTCC ACCGCTAACG CCGCTGACGC CACTTATGTC
GATTCGTCGT CGAAGGGCGC CAACCCGCCG TCTGCCGTCC TAGTCGCCGC ATCCACGCGC
GGCGATGCGG CGCTGCTCGA CCCCGTCACC GTCACGGCCA CCCGTACCGC CACCGCCGCG
AGCCGCACGG CCGCGTCCGT GTCGGTGATC ACCGACGACG ATCTCGAGGA ACAGCAGGCC
ACCAACATCA AGGACGCGCT GCGCTACGAG CCGGGCGTCA CGGTGCGCCG CACCGCGTAT
CGCCCCGGCA GCGCCGCACT CGGCGGCGGC CGCGACGGCG ATTCGAGCAT CAACATCCGC
GGCCTCGAAG GCAATCGCGT GCTGCTGATG GAAGACGGCA TCCGCCTGCC GAACGCGTTC
TCGTTCGGGC CGCTCGAAGC CGGGCGCGGC GACTACTCCG ATGTCGACAC GCTTAAGCGT
ATCGAGATCC TGCGCGGGCC GGCATCGGCG CTGTACGGCA GCGACGGGCT GACCGGCGCG
GTGAACTTCA TCACGAAGGA TCCGCGCGAC CTGCTGTCGA TCTACGGCAA GCCCATCTAC
TTCTCGTTCC GGCCGAGCTA CGACTCGGCC GATCGCAGCG TCGGCGCGAC GGTGTCGGCC
GCGGGCGGCA ACGACCGCGT GCAGGGGATG ATCATCGCCG ACGGCCGGCG CGGCCACGAA
GTCGACACGC GCGGCAGCAA CAATTCGGCG AGCACGCTGC GCACGACGTC GAACCCGCAG
GACGTCTATT CGGAATCGCT GCTCGGCAAA TTCGTGCTGA CGCCCACCGC GCGCGACACG
ATCAAGTTCA CAGCCGAAAC CGTGCAGCGG CGCGTGAGCA CCGACGTGCT GTCCGCGATC
AACCCGCCGA CCACGCTCGG CCTCACGACG AACGACCGCC TCGAGCGCAA CCGCTTCAGC
GTCGACTACG ACTTCCGCGA CGATGCGTTG CGCTGGTTCC AGACCGCGCA CGTGCAGTTC
TACTACCAGG ACGCGAAGCA GGATCAATAC GCGTTCGAGA CGCGCGGCAG GCAGCCTTCG
CGCTCCCGCG ACAACCAGTA CCAGGAGCGC ACGTTCGGCG GTTCCGCGTT CGCCGAAAGC
GGCTTCTCGA CCGGCCCGCT CGCGCACAAG CTGCTGTACG GCGTCGACGG CAGCCTGTCG
CGCGTGACGA ACCTGCGCGA CGGCACGGTG CCGGGCGTCG GCGAGGCGTT CCCGAACAAG
GCGTTTCCCG ATACCGACTA CACGCTGTTC GGCGCGTTCG TGCAGGACCA GATCGGTTAC
GGCCGCCTGC TCGTCACGCC GGGGCTGCGC TTCGATACGT ACCGGCTGAG CGCGTCGCAG
AACGATCCGT TGTTCACCGG CACCGCGGTG TCGACGAGCG CGAACGAAGT GTCGCCACGC
GTCGCGGTGC TCTACGAGAT CACGCCCGCG CTGATTCCGT ATGCGCAATA CGCGCACGGC
TTCCGCGCGC CGACACCCGA TCAAGTGAAC AGCAGCTTCT CGAACCCGGT GTACGGCTAC
ACGTCGATCG GCAATCCGAA CCTGAAGCCG GAGACCAGCG ACACGTTCGA AGCGGGCCTG
CGCGGCAAGG CCGGCACCGG CTACGGCGTC GTGCGCTACA GCGCGGCCGC GTTCACCGGC
CGCTACCGCA ACTTCATCTC GCGCACGACG ATCTCGGGCA GCGGCCGGCC GGTCGACCCG
TTCGTGTTCC AGTACGTGAA CTTCGCCGAC GCGCGCATCC ACGGCTTCGA AGGCCGCGCC
GAATGGGTGA TGCCCAACGG CATCACGTTG AAGACGGCGA TGGCGTTCAC GAAGGGCTCG
ACGCAGAACA ACGGCGCGGC CAGTCAGCCG CTCGATACGG TCACCCCGTT CTCGGCCGTG
TTCGGCGTGC GCTACGAACC GGGCGAGCGC TGGTTCGTGC AGACCGACCT GCTGTTCCAG
GCCGCGAAAC GCGACAAGGA CATCCCGGCA GATGCGTGCC CGGGAGCCAG AACGTCGTGC
TTCGCGCCGC CGTCGTCGTT CGTCGTCGAC CTGCGCGGCG GCTACCGCTT CAACAAGCAC
GTGAGCGCGA CGATCGGCAT TCGCAACCTG TTCGATCGCA AGTACTGGAA CTGGTCGGAC
GTGCGCGGCA TCGCGGCCGA TTCGCAGGTG CTCGACGCGT ACACGTCGTC CGGGCGCACC
GTCGCCGTCA GCATGAAGGT GGATTTTTGA
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| Protein sequence | MHCYSLARRP ICAALFGVFG LSAAPAYADS TANAADATYV DSSSKGANPP SAVLVAASTR
GDAALLDPVT VTATRTATAA SRTAASVSVI TDDDLEEQQA TNIKDALRYE PGVTVRRTAY
RPGSAALGGG RDGDSSINIR GLEGNRVLLM EDGIRLPNAF SFGPLEAGRG DYSDVDTLKR
IEILRGPASA LYGSDGLTGA VNFITKDPRD LLSIYGKPIY FSFRPSYDSA DRSVGATVSA
AGGNDRVQGM IIADGRRGHE VDTRGSNNSA STLRTTSNPQ DVYSESLLGK FVLTPTARDT
IKFTAETVQR RVSTDVLSAI NPPTTLGLTT NDRLERNRFS VDYDFRDDAL RWFQTAHVQF
YYQDAKQDQY AFETRGRQPS RSRDNQYQER TFGGSAFAES GFSTGPLAHK LLYGVDGSLS
RVTNLRDGTV PGVGEAFPNK AFPDTDYTLF GAFVQDQIGY GRLLVTPGLR FDTYRLSASQ
NDPLFTGTAV STSANEVSPR VAVLYEITPA LIPYAQYAHG FRAPTPDQVN SSFSNPVYGY
TSIGNPNLKP ETSDTFEAGL RGKAGTGYGV VRYSAAAFTG RYRNFISRTT ISGSGRPVDP
FVFQYVNFAD ARIHGFEGRA EWVMPNGITL KTAMAFTKGS TQNNGAASQP LDTVTPFSAV
FGVRYEPGER WFVQTDLLFQ AAKRDKDIPA DACPGARTSC FAPPSSFVVD LRGGYRFNKH
VSATIGIRNL FDRKYWNWSD VRGIAADSQV LDAYTSSGRT VAVSMKVDF
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