Gene Bamb_4754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4754 
Symbol 
ID4313646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1746798 
End bp1747913 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content70% 
IMG OID638152598 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_776638 
Protein GI115359500 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.750935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG ACCCGCTTTT TCAACCGCTG CGATTCGGCG CGCTGACGCT GCCGAACCGT 
ATCGTGATGC CGCCGATGAC GCGTTCGCGC GCGAGCCAGC CCGGCGACGA AGCCAACGAA
CTGATGGCCG CGTATTACGC GCAGCGCGCG AGCGCCGGCC TGATCGTCAG CGAAGGCACC
TACATCGCGC CGCTCGGCAA GGGCTACGCG TGGACGCCCG GCATCCACAC GCCGTCGCAG
GTCGCCGGCT GGCGCCGGGT GACGGACGCC GTGCACGCCG CGCACGGCCG CATTTTCGCG
CAGCTGTGGC ATGTCGGCCG GCTCAGCCAT ACGAGCCTGC TCGGTGGCAA GCAACCGGTG
TCGTCGTCGC CGATCCAGGC GAAAGGCGTG AACGTGTTCA TCGCCGGCGA GGACGGCAGC
ACGCCGGGCT TCGTGCAGGC GTCCGAGCCG CGCGCGCTGT CCGTCGACGA GATCCGCGAG
ATCGTCGATC AATACCGCGC CGCCGCCCGC AACGCGATCG AGGCCGGCTT CGACGGCGTC
GAGCTGCACG GCGCGAACGG CTATCTCGTG AACCAGTTCA TCGATTCGAA CGCGAACACG
CGCACCGACG CGTACGGCGG CTCGCTGGAA AACCGGCTGC GCTTCCTGCG CGAAGTCGTG
CAGGCGCTGA TCGAAGGCAC CGGCGACGCG TCGCGCGTCG GCGTCCGCCT CGCGCCGCTG
ACCACGTTGA ACGGCTGCGT CGACGACGAT CCGGAAACGA CCTACCTCGC CGCCGCGAAG
CTGCTCGGCG AACTCGGCAT CGGCTACCTG CACATCGCGG AAGCCGACTG GGACGACGCG
CCGCTGATGC CGGTCGAGTT CAAGCGGCAA CTGCGCGCGG CGTTCCCCGG CGTGCTGATC
TACGCCGGCG CATACACGGC CGAACGCGCC CGCGAAGCGA TCGCCGCCGG CTGGGCCGAC
CTGATCGCAT TCGGCCGCCC GTTCGTCGCG AACCCCGACC TGCCCGAGCG CCTGCGCACC
GGTGCCGCGC TCGCGCCGCA CGATCGCAAC ACGCTGTTCG GCGGCGGTGC GAAAGGCCTG
ATCGACTATC CGACGCTCGC GCAGGCCGCG GCCTGA
 
Protein sequence
MTHDPLFQPL RFGALTLPNR IVMPPMTRSR ASQPGDEANE LMAAYYAQRA SAGLIVSEGT 
YIAPLGKGYA WTPGIHTPSQ VAGWRRVTDA VHAAHGRIFA QLWHVGRLSH TSLLGGKQPV
SSSPIQAKGV NVFIAGEDGS TPGFVQASEP RALSVDEIRE IVDQYRAAAR NAIEAGFDGV
ELHGANGYLV NQFIDSNANT RTDAYGGSLE NRLRFLREVV QALIEGTGDA SRVGVRLAPL
TTLNGCVDDD PETTYLAAAK LLGELGIGYL HIAEADWDDA PLMPVEFKRQ LRAAFPGVLI
YAGAYTAERA REAIAAGWAD LIAFGRPFVA NPDLPERLRT GAALAPHDRN TLFGGGAKGL
IDYPTLAQAA A