Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4753 |
Symbol | dkgB |
ID | 4313645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1745926 |
End bp | 1746732 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638152597 |
Product | 2,5-diketo-D-gluconate reductase B |
Protein accession | YP_776637 |
Protein GI | 115359499 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.10147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.725846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG TTCCCGCATT CGGCCTCGGC ACCTTCCGCC TGCAGGGCCA GGTCGTCATC GACTCGGTCC GCAACGGCCT CGACGTCGGC TACCGCGCGA TCGACACCGC GCAGATCTAC GGCAACGAAG CCGAAGTCGG CGAAGCGATC GCCGCATCGG GCGTGCGCCG CGAAGACCTG TTCCTCACGA CCAAGATCTG GGTCGACAAC TACGCGCCGG AAAAACTGGC GGCCAGCCTC GAGGAAAGCC TGCGCAAGCT GCGCACCGAC ATCGTCGACC TGACGCTGAT CCACTGGCCG GCGCCGGGCA ACGGCGTGTC GATCCACGCG TTCATGACCG CGCTCGCCGA CGCGAAGGCG AAGGGCCTCA CGCGCCAGAT CGGCATCTCG AACTTCAACA TCGAACTGAC GAAGGAAGCG ATCGCGGCCG TCGGCAAGGA TGCGATCGCG ACGAACCAGA TCGAACTGAG CCCGTACCTG CAGAACCGCA AGCTGGTCGA GTTCCTGAAC GGCGAAGGCA TCCACGTGAC GTCGTACATG ACGCTCGCCT ACGGCAAGGT GCTCGGCGAC CCGGTGATCG GCGCGATCGC GCAACGTCAC GACGCGACGC CGGCGCAGGT TGCGCTCGCG TGGGCGCTGC AGCTCGGCTA CTCGGTGATT CCGTCGTCGA CGAAGCGCGA GAACCTCGCG AGCAACCTGC TCGCGCAGAC GCTGCGCCTG ACCGACGAAG ACATGGCGCA GATCGCCGCG CTCGAGCGCA ACGGCCGCGA AGTCGACCCA GCCGGCCTCG CGCCGACGTG GGACTAA
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Protein sequence | MSNVPAFGLG TFRLQGQVVI DSVRNGLDVG YRAIDTAQIY GNEAEVGEAI AASGVRREDL FLTTKIWVDN YAPEKLAASL EESLRKLRTD IVDLTLIHWP APGNGVSIHA FMTALADAKA KGLTRQIGIS NFNIELTKEA IAAVGKDAIA TNQIELSPYL QNRKLVEFLN GEGIHVTSYM TLAYGKVLGD PVIGAIAQRH DATPAQVALA WALQLGYSVI PSSTKRENLA SNLLAQTLRL TDEDMAQIAA LERNGREVDP AGLAPTWD
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