Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4749 |
Symbol | |
ID | 4313641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1742215 |
End bp | 1743159 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152593 |
Product | LysR family transcriptional regulator |
Protein accession | YP_776633 |
Protein GI | 115359495 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.996632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATCA CGCTCGACGA ACTCCAGGCC TTTGCCGCCG TGGTCGACTC CGGTTCGATC ACCGCTGCCG CGCAGCAGCT CGACCTCACC GTGTCGGCCA CGAGCCGCAC GCTCGCGCGG CTCGAGGAGA AGCTGAAGAC CACGCTGCTG CGCCGGACCA CGCGCCGGCT CGAATTGACC GAAGAAGGGC GTGCGTTCCT GCAGGATGCG CGCGCCATCA TCGAATCGGT CGAGACCGCC GAGGAGCAGA TGCTCGCGCG GCGCGAGATG CCGTCGGGGC GCTTGCGCGT CGATGCCGCG ACGCCGTTCA TGCTGCACGT GATCGTGCCG CTCGTGCACG GCTACCGCGA ACGGTTCCCG AAGGTCGAAC TGGAGTTGAA CAGCAACGAG GGGATCATCG ACCTGCTGGA GCGGCGCACC GACGTCGCGA TCCGCATCGG CCGGCTCAAG GATTCGACGC TGCACAGCCG GCGCATCGGC AACAGCCGGC TGCGCATCCT CGCGAGCCCC GCATACCTCG AAGCGCACGG CCAGCCGCGC AAGGTCGAGG ATCTCGCCAG GCACACGCTG CTCGGCTTCA CGCAGCCCGA ATCGCTGAAC GTCTGGCCGA TCCTCGGCGC GGACGGCGAG CCGTGCCGCA TCGAGCCCGC CATCTGGTCG TCGAGCGGCG AGACGCTGCG GCAGCTCGCG CTGGAGGGCG CGGGCGTCGT GTGCCTGTCG GATTTCATGA CCGCGCAGGA TCGCGAGGCC GGCCGGCTCG TGCAGGTGCT CGCGCGGCAG ACGCTCGACG TCGAACAGCC GATCAACGCG GTGTATTACC GGAACACCGC GATTTCGTCG CGGATCGCGT CGTTCGTCGA TTACATGATC GAGGTGCTGG GCGGCAGCAG CGGCGGCAGC GGGGCGCCGG CGCGGCGCAA GGCTGCGTGG CTGGAGCCGC TGTAA
|
Protein sequence | MKITLDELQA FAAVVDSGSI TAAAQQLDLT VSATSRTLAR LEEKLKTTLL RRTTRRLELT EEGRAFLQDA RAIIESVETA EEQMLARREM PSGRLRVDAA TPFMLHVIVP LVHGYRERFP KVELELNSNE GIIDLLERRT DVAIRIGRLK DSTLHSRRIG NSRLRILASP AYLEAHGQPR KVEDLARHTL LGFTQPESLN VWPILGADGE PCRIEPAIWS SSGETLRQLA LEGAGVVCLS DFMTAQDREA GRLVQVLARQ TLDVEQPINA VYYRNTAISS RIASFVDYMI EVLGGSSGGS GAPARRKAAW LEPL
|
| |