Gene Bamb_4734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4734 
Symbol 
ID4313626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1728265 
End bp1729122 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content61% 
IMG OID638152578 
Productalpha/beta hydrolase fold 
Protein accessionYP_776618 
Protein GI115359480 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCA CGATGACCGA CACCCATATC ACTACGCCCA CGCGCTTCGT GGATGTCAAC 
GGTACTCGAT TCGCCTACCG CCGCTGGGGT AACGCAGATT CTTCGCAGCC GCCGTTACTG
TTCCTGCAGC ACTTCCGCGG CGGGATGGAC AACTGGGATC CACTGATGAC GGATGGGCTT
GCCCAAAGCC GCGAAGTCAT TCTCTATAAC GGTCGCGGCG TCGCTTCCTC CGGCGGACAA
CCACGAACTC GCATCGAGGA CATGGCCGAT GACGCAGCGG CCTTCGTTCG CGCACTCGGC
TTGCAGCAAA TCGACGTTCT GGGTTTTTCG CTGGGCGGGT TTCAGGCGCT CGACCTGACC
TGGCGCCATC CCGAGCTCGT GCGCAAGCTG ATGCTGCTGG GCACCGGGCC GCGCGGGGGG
AATCCGGAAA TGGAGCAGCG CGTGTTGACC ACCGCGGTCA ATCCGGTCCC GGTGTTCGAA
GACTTTCTCT ACCTGTTCTT CGGACGATCA GCAGAAGCAG AGCAGGCGGC AAGGGCGTTC
TGGGAGCGGC GCCATATGCG AGCCGACCAG GATCCGCCAT CCTCGCCGGA GGTCTCGATC
GCACAGATCG AGGCCAACGT GCTGTATATG CCGAGGCTCT CGGAAGACGA TCCTTTCGCG
TATCTGCGCG GCATCCGGCA GCCTACGTTC ATCCTCAATG GCGTGAACGA CGTGATGGTC
CCGACGATTA ACTCCTTCTA CATGGCGCGC AATCTGCCAA ATGCGCAGTT GTTCATTTAC
CCGGATGCCG GCCACGCCGC GCAGTTTCAG TACCCGCAAC GCTTCCTGGG TCACGCAGTT
CAGTTCCTGA GCGAGTGA
 
Protein sequence
MDTTMTDTHI TTPTRFVDVN GTRFAYRRWG NADSSQPPLL FLQHFRGGMD NWDPLMTDGL 
AQSREVILYN GRGVASSGGQ PRTRIEDMAD DAAAFVRALG LQQIDVLGFS LGGFQALDLT
WRHPELVRKL MLLGTGPRGG NPEMEQRVLT TAVNPVPVFE DFLYLFFGRS AEAEQAARAF
WERRHMRADQ DPPSSPEVSI AQIEANVLYM PRLSEDDPFA YLRGIRQPTF ILNGVNDVMV
PTINSFYMAR NLPNAQLFIY PDAGHAAQFQ YPQRFLGHAV QFLSE