Gene Bamb_4728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4728 
Symbol 
ID4313620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1721587 
End bp1723287 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content64% 
IMG OID638152572 
ProductFAD dependent oxidoreductase 
Protein accessionYP_776612 
Protein GI115359474 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGA TGAGCCCCGC GAACGGGCGC GATAGCAACC ACTTCGACGT GATCATCCTC 
GGCTCGGGCA TGTCCGGCAC CCAGATGGGC GCCATCCTGG CCAAACAAAA ATTTCGAGTG
CTGATCATCG AAGAGTCGTC GCATCCGCGG TTCACGATCG GCGAATCGTC GATCCCCGAG
ACGTCTCTGA TGAACCGCAT CATCGCCGAT CGCTACGGCA TCCCGGAGCT CGACCACATC
ACGTCGTTCT ACTCGACGCA GCGTTACGTC GCGTCGAGCA CGGGCATCAA GCGCAACTTC
GGCTTCGTGT TCCACAAGCC CGGCCAGGAG CACGACCCGA AGGAGTTCAC GCAGTGCGTG
ATTCCCGAGC TGCCGTGGGG CCCGGAGAGC CATTATTACC GGCAAGACGT CGACGCCTAC
CTGTTGCAAG CCGCCATCAA ATACGGCTGC ACGGTCCGCC AGAGGACGAG CGTGACCGAA
TATCACGCGG ACAAGGACGG CGTCGCGGTG ACCACTGCCC AGGGCGATCG GTTCACCGGC
CGCTACATGA TCGACTGCGG CGGGCCGCGC GCGCCGCTCG CGACCAAGTT CGGGCTCCGC
GAAGAGCCGT GCCGCTTCAA GACGCACTCG CGCAGCCTCT ACACGCACAT GCTCGGGGTC
AAGCCGTTCG ACGACATCTT CAAGGTCAAG GGGCAGCGCT GGCGCTGGCA CGAGGGAACC
CTGCACCACA TGTTCGACGG CGGCTGGCTG TGGGTGATTC CGTTCAACAA CCACCCGCGC
TCGACCAACA ACCTGGTGAG CGTCGGCCTG CAGCTCGACC CGCGCGTCTA CCCGAAAACG
GACATCTCCG CGCAGCAGGA ATTCGACGAG TTCCTCGCGC GGTTCCCGAG CATCGGCGCG
CAGTTCCGGG ACGCCGTGCC GGTGCGCGAC TGGGTCAGGA CCGACCGCCT GCAGTTCTCG
TCGAGCGCCT GCGTCGGCGA CCGCTACTGC CTGATGCTGC ACGCGAACGG GTTCATCGAC
CCGCTGTTCT CCCGCGGGCT CGAGAACACC GCGGTGACCA TCCATGCGCT CGCGGCGCGC
CTCATCAAGG CGCTGCGCGA CGACGACTTC TCCCCCGAGC GCTTCGAGTA TATCGAGCGC
CTGCAGCAAA AGCTGCTGGA CCACAACGAC GACTTCGTCA GCAGCTGCTA CACGGCGTTC
AAGGACTTCC GGCTGTGGGA CGCGTTCCAC AGGCTGTGGG CGGTCGGCAC GATCCTCGGG
CAGTTCCGGC TGGTGCAAGC CCACGCGAGG TTCCGCGCGT CGCGCGACGA GGGCGACCTC
GATCACCTCG ACAACGACCC GCCGTACCTC GGGTACCTGT GCGCGGACAT GGAGGAGTAC
TACCAGTTGT TCAACGACGC CAAGGCCGAG GTCGAGGCCG TGAGCGCCGG GGACAAGCCG
GCCGAGGAGG CCGCGGCGAG AATTCACGCC CTCATCGACG AACGGGAGTT CGCCAAGCCG
ATGTTCGGCT TCGGGTACTG CATCACGGGG GAAAAGCCGC AGCTCAACAA CTCGAAGTAC
AGCCTGCTGC CGGCGATGAA GCTGATGTAC TGGACGCAAA CCAGCGCGCC GGCAGAGGTG
AAAAAGTACT TCGACTACAA CCCGATGTTC GCGCTGCTCA GGGCGTACAT CACGACCCGC
ATCGGCCTGG CGCTGAAGTA A
 
Protein sequence
MTQMSPANGR DSNHFDVIIL GSGMSGTQMG AILAKQKFRV LIIEESSHPR FTIGESSIPE 
TSLMNRIIAD RYGIPELDHI TSFYSTQRYV ASSTGIKRNF GFVFHKPGQE HDPKEFTQCV
IPELPWGPES HYYRQDVDAY LLQAAIKYGC TVRQRTSVTE YHADKDGVAV TTAQGDRFTG
RYMIDCGGPR APLATKFGLR EEPCRFKTHS RSLYTHMLGV KPFDDIFKVK GQRWRWHEGT
LHHMFDGGWL WVIPFNNHPR STNNLVSVGL QLDPRVYPKT DISAQQEFDE FLARFPSIGA
QFRDAVPVRD WVRTDRLQFS SSACVGDRYC LMLHANGFID PLFSRGLENT AVTIHALAAR
LIKALRDDDF SPERFEYIER LQQKLLDHND DFVSSCYTAF KDFRLWDAFH RLWAVGTILG
QFRLVQAHAR FRASRDEGDL DHLDNDPPYL GYLCADMEEY YQLFNDAKAE VEAVSAGDKP
AEEAAARIHA LIDEREFAKP MFGFGYCITG EKPQLNNSKY SLLPAMKLMY WTQTSAPAEV
KKYFDYNPMF ALLRAYITTR IGLALK